Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 AC018695.7-201ENST00000624587 2492 ntBASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 IGHGP-201ENST00000390555 1178 ntBASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 AC068472.1-201ENST00000474589 881 ntBASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SLC44A1Q8WWI5 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 AC093525.9-201ENST00000624961 1746 ntBASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 AC092053.1-201ENST00000605787 1936 ntBASIC17.59■□□□□ 0.41
SLC44A1Q8WWI5 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
SLC44A1Q8WWI5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.58■□□□□ 0.41
SLC44A1Q8WWI5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC44A1Q8WWI5 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLC44A1Q8WWI5 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC44A1Q8WWI5 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.58■□□□□ 0.41
SLC44A1Q8WWI5 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
SLC44A1Q8WWI5 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC44A1Q8WWI5 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC44A1Q8WWI5 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC44A1Q8WWI5 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLC44A1Q8WWI5 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 AL353692.3-201ENST00000407031 1396 ntBASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 SPDYE15P-201ENST00000424157 909 ntBASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 AL441883.1-201ENST00000566170 1045 ntBASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 AC140113.3-201ENST00000605663 199 ntBASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC44A1Q8WWI5 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC44A1Q8WWI5 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms