Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
U2AF1L4Q8WU68 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.06■□□□□ 0.8
U2AF1L4Q8WU68 AC090340.1-201ENST00000620778 4980 ntBASIC20.06■□□□□ 0.8
U2AF1L4Q8WU68 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
U2AF1L4Q8WU68 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.06■□□□□ 0.8
U2AF1L4Q8WU68 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
U2AF1L4Q8WU68 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 PMPCAP1-201ENST00000508114 1576 ntBASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 VN2R19P-201ENST00000442399 1052 ntBASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 MIR4751-201ENST00000578027 74 ntBASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 AC138761.1-201ENST00000584393 385 ntBASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 AC093512.1-201ENST00000617969 520 ntBASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.05■□□□□ 0.8
U2AF1L4Q8WU68 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 AL139400.1-201ENST00000366220 510 ntBASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 AC112698.1-201ENST00000510299 916 ntBASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 AC073592.3-201ENST00000625118 1834 ntBASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2AF1L4Q8WU68 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 HCG4B-203ENST00000450128 991 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms