Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.16■□□□□ 0.98
SNED1Q8TER0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNED1Q8TER0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
SNED1Q8TER0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNED1Q8TER0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNED1Q8TER0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC21.16■□□□□ 0.98
SNED1Q8TER0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNED1Q8TER0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.15■□□□□ 0.98
SNED1Q8TER0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNED1Q8TER0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNED1Q8TER0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNED1Q8TER0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.15■□□□□ 0.98
SNED1Q8TER0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.15■□□□□ 0.98
SNED1Q8TER0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.15■□□□□ 0.98
SNED1Q8TER0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNED1Q8TER0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
SNED1Q8TER0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNED1Q8TER0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNED1Q8TER0 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNED1Q8TER0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNED1Q8TER0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNED1Q8TER0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.15■□□□□ 0.98
SNED1Q8TER0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNED1Q8TER0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNED1Q8TER0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNED1Q8TER0 BAD-202ENST00000394531 631 ntTSL 3 BASIC21.15■□□□□ 0.98
SNED1Q8TER0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SNED1Q8TER0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC21.15■□□□□ 0.98
SNED1Q8TER0 AC015922.1-201ENST00000421102 1152 ntBASIC21.15■□□□□ 0.98
SNED1Q8TER0 UGT1A2P-201ENST00000454886 866 ntBASIC21.15■□□□□ 0.98
SNED1Q8TER0 HLA-J-202ENST00000469281 1241 ntBASIC21.15■□□□□ 0.98
SNED1Q8TER0 AC069335.1-201ENST00000489972 472 ntBASIC21.15■□□□□ 0.98
SNED1Q8TER0 GATB-205ENST00000508611 605 ntTSL 2 BASIC21.15■□□□□ 0.98
SNED1Q8TER0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNED1Q8TER0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC21.15■□□□□ 0.98
SNED1Q8TER0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC21.15■□□□□ 0.98
SNED1Q8TER0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNED1Q8TER0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC21.15■□□□□ 0.98
SNED1Q8TER0 AP001059.3-201ENST00000619053 235 ntBASIC21.15■□□□□ 0.98
SNED1Q8TER0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNED1Q8TER0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNED1Q8TER0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SNED1Q8TER0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.15■□□□□ 0.98
SNED1Q8TER0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNED1Q8TER0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC21.15■□□□□ 0.98
SNED1Q8TER0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SNED1Q8TER0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNED1Q8TER0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNED1Q8TER0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNED1Q8TER0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SNED1Q8TER0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC21.14■□□□□ 0.98
SNED1Q8TER0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SNED1Q8TER0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SNED1Q8TER0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SNED1Q8TER0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SNED1Q8TER0 AC002056.1-201ENST00000395613 760 ntBASIC21.14■□□□□ 0.98
SNED1Q8TER0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.14■□□□□ 0.98
SNED1Q8TER0 AC093214.1-201ENST00000511688 1107 ntBASIC21.14■□□□□ 0.98
SNED1Q8TER0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.14■□□□□ 0.98
SNED1Q8TER0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SNED1Q8TER0 AC087641.1-201ENST00000557561 1021 ntBASIC21.14■□□□□ 0.98
SNED1Q8TER0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC21.14■□□□□ 0.98
SNED1Q8TER0 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SNED1Q8TER0 AC116407.2-201ENST00000613639 860 ntBASIC21.14■□□□□ 0.98
SNED1Q8TER0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNED1Q8TER0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNED1Q8TER0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.14■□□□□ 0.97
SNED1Q8TER0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC21.14■□□□□ 0.97
SNED1Q8TER0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC21.14■□□□□ 0.97
SNED1Q8TER0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SNED1Q8TER0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNED1Q8TER0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SNED1Q8TER0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.14■□□□□ 0.97
SNED1Q8TER0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SNED1Q8TER0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SNED1Q8TER0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SNED1Q8TER0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNED1Q8TER0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNED1Q8TER0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SNED1Q8TER0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC21.13■□□□□ 0.97
SNED1Q8TER0 AC244107.1-201ENST00000442033 332 ntBASIC21.13■□□□□ 0.97
SNED1Q8TER0 AC002472.2-201ENST00000442739 958 ntBASIC21.13■□□□□ 0.97
SNED1Q8TER0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SNED1Q8TER0 AC079140.1-201ENST00000508039 487 ntBASIC21.13■□□□□ 0.97
SNED1Q8TER0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC21.13■□□□□ 0.97
SNED1Q8TER0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SNED1Q8TER0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SNED1Q8TER0 AC243562.1-201ENST00000560672 389 ntBASIC21.13■□□□□ 0.97
SNED1Q8TER0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNED1Q8TER0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SNED1Q8TER0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SNED1Q8TER0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.13■□□□□ 0.97
SNED1Q8TER0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNED1Q8TER0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.13■□□□□ 0.97
SNED1Q8TER0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNED1Q8TER0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SNED1Q8TER0 AC135776.1-201ENST00000319817 2481 ntBASIC21.13■□□□□ 0.97
SNED1Q8TER0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC21.13■□□□□ 0.97
SNED1Q8TER0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SNED1Q8TER0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms