Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 SIGLEC30P-201ENST00000455569 941 ntBASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 AC004706.3-202ENST00000621574 984 ntBASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 PGM5P2-202ENST00000637225 1043 ntBASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SH3RF2Q8TEC5 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 MIR1233-2-201ENST00000408138 82 ntBASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 MIR1233-1-201ENST00000408722 82 ntBASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 AC007967.2-201ENST00000432613 625 ntBASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 IGHV3-52-201ENST00000519770 353 ntBASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SH3RF2Q8TEC5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 PCDHB18P-201ENST00000524813 2368 ntBASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 ELK2BP-201ENST00000415014 1224 ntBASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 STK19B-204ENST00000512515 211 ntBASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 STK25P1-201ENST00000585406 838 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms