Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 AC098831.1-202ENST00000438821 336 ntBASIC17.66■□□□□ 0.42
CHD5Q8TDI0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHD5Q8TDI0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.65■□□□□ 0.42
CHD5Q8TDI0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHD5Q8TDI0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHD5Q8TDI0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHD5Q8TDI0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.65■□□□□ 0.42
CHD5Q8TDI0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHD5Q8TDI0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHD5Q8TDI0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHD5Q8TDI0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.65■□□□□ 0.42
CHD5Q8TDI0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.65■□□□□ 0.42
CHD5Q8TDI0 AL353135.1-201ENST00000606729 504 ntBASIC17.65■□□□□ 0.42
CHD5Q8TDI0 AC117500.6-201ENST00000624871 588 ntBASIC17.65■□□□□ 0.42
CHD5Q8TDI0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHD5Q8TDI0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CHD5Q8TDI0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHD5Q8TDI0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.65■□□□□ 0.42
CHD5Q8TDI0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.65■□□□□ 0.42
CHD5Q8TDI0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHD5Q8TDI0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHD5Q8TDI0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHD5Q8TDI0 AC005332.8-201ENST00000622750 2735 ntBASIC17.65■□□□□ 0.42
CHD5Q8TDI0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHD5Q8TDI0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.65■□□□□ 0.42
CHD5Q8TDI0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHD5Q8TDI0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 AC108073.2-201ENST00000464002 357 ntBASIC17.64■□□□□ 0.41
CHD5Q8TDI0 RNPS1P1-201ENST00000507437 918 ntBASIC17.64■□□□□ 0.41
CHD5Q8TDI0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 MIR1199-201ENST00000621445 119 ntBASIC17.64■□□□□ 0.41
CHD5Q8TDI0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CHD5Q8TDI0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.63■□□□□ 0.41
CHD5Q8TDI0 AC139713.2-201ENST00000641328 2723 ntBASIC17.63■□□□□ 0.41
CHD5Q8TDI0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.63■□□□□ 0.41
CHD5Q8TDI0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHD5Q8TDI0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHD5Q8TDI0 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.63■□□□□ 0.41
CHD5Q8TDI0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHD5Q8TDI0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.63■□□□□ 0.41
CHD5Q8TDI0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHD5Q8TDI0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.63■□□□□ 0.41
CHD5Q8TDI0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.63■□□□□ 0.41
CHD5Q8TDI0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.63■□□□□ 0.41
CHD5Q8TDI0 AC034105.1-201ENST00000563488 319 ntBASIC17.63■□□□□ 0.41
CHD5Q8TDI0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CHD5Q8TDI0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.63■□□□□ 0.41
CHD5Q8TDI0 BX640515.1-201ENST00000617215 977 ntBASIC17.63■□□□□ 0.41
CHD5Q8TDI0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.63■□□□□ 0.41
CHD5Q8TDI0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHD5Q8TDI0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHD5Q8TDI0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHD5Q8TDI0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHD5Q8TDI0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CHD5Q8TDI0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHD5Q8TDI0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHD5Q8TDI0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.63■□□□□ 0.41
CHD5Q8TDI0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 RNA5SP415-201ENST00000517246 115 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms