Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 AC005104.2-201ENST00000427818 678 ntBASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 MIR1199-201ENST00000621445 119 ntBASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 AC132938.5-201ENST00000624980 1813 ntBASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 AL020989.1-201ENST00000422979 469 ntBASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.4■□□□□ 0.54
SHKBP1Q8TBC3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.54
SHKBP1Q8TBC3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 AC136632.2-201ENST00000512891 861 ntBASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 AC055717.3-201ENST00000622967 595 ntBASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 AC005593.1-201ENST00000624894 515 ntBASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 AC100803.2-201ENST00000562459 1963 ntBASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHKBP1Q8TBC3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 AC148477.5-201ENST00000625164 1645 ntBASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 RNA5SP416-201ENST00000516838 111 ntBASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms