Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 PMS2P4-201ENST00000412466 1052 ntBASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 SIGLEC30P-201ENST00000455569 941 ntBASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 HLA-J-202ENST00000469281 1241 ntBASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 AC023141.13-201ENST00000604991 943 ntBASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 GGTLC5P-201ENST00000617623 998 ntBASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SNIP1Q8TAD8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNIP1Q8TAD8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNIP1Q8TAD8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNIP1Q8TAD8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNIP1Q8TAD8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.52■□□□□ 0.23
SNIP1Q8TAD8 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNIP1Q8TAD8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SNIP1Q8TAD8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 AL161938.1-201ENST00000569833 2180 ntBASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 AC067863.1-201ENST00000494933 530 ntBASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 AC109322.1-201ENST00000524499 1264 ntBASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 REXO1L3P-201ENST00000622202 1288 ntBASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 LINC00628-201ENST00000628516 1289 ntBASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 AL121761.2-201ENST00000598007 1648 ntBASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 AC148477.5-201ENST00000625164 1645 ntBASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNIP1Q8TAD8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 AC132938.5-201ENST00000624980 1813 ntBASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 AC120498.9-201ENST00000339021 3867 ntBASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 AC003669.1-201ENST00000334569 611 ntBASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 AP002414.1-201ENST00000391405 1147 ntBASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 KLF4P1-201ENST00000412782 1185 ntBASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 SERPINA7P1-201ENST00000443077 631 ntBASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms