Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 AL590787.1-201ENST00000568856 1315 ntBASIC13.59□□□□□ -0.23
LINC01006Q8NI28 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC01006Q8NI28 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
LINC01006Q8NI28 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC01006Q8NI28 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC01006Q8NI28 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC01006Q8NI28 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 AC027612.4-201ENST00000605371 583 ntBASIC13.58□□□□□ -0.24
LINC01006Q8NI28 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 AC091812.2-201ENST00000619081 385 ntBASIC13.58□□□□□ -0.24
LINC01006Q8NI28 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 KRT18P55-202ENST00000578578 1546 ntBASIC13.58□□□□□ -0.24
LINC01006Q8NI28 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01006Q8NI28 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC01006Q8NI28 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LINC01006Q8NI28 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01006Q8NI28 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC01006Q8NI28 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01006Q8NI28 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01006Q8NI28 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01006Q8NI28 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01006Q8NI28 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.56□□□□□ -0.24
LINC01006Q8NI28 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01006Q8NI28 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01006Q8NI28 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LINC01006Q8NI28 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01006Q8NI28 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01006Q8NI28 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC01006Q8NI28 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.56□□□□□ -0.24
LINC01006Q8NI28 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms