Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 TP73-AS1-210ENST00000637775 1455 ntBASIC15.39■□□□□ 0.05
CPEB3Q8NE35 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 HLA-J-201ENST00000462773 1622 ntBASIC15.38■□□□□ 0.05
CPEB3Q8NE35 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPEB3Q8NE35 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 AL139384.1-201ENST00000612143 3047 ntBASIC15.37■□□□□ 0.05
CPEB3Q8NE35 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 AC011467.2-201ENST00000598425 242 ntBASIC15.37■□□□□ 0.05
CPEB3Q8NE35 AC099336.1-202ENST00000602961 463 ntBASIC15.37■□□□□ 0.05
CPEB3Q8NE35 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPEB3Q8NE35 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPEB3Q8NE35 SIRPAP1-201ENST00000448467 1770 ntBASIC15.36■□□□□ 0.05
CPEB3Q8NE35 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CPEB3Q8NE35 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPEB3Q8NE35 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPEB3Q8NE35 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.36■□□□□ 0.05
CPEB3Q8NE35 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPEB3Q8NE35 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPEB3Q8NE35 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPEB3Q8NE35 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.36■□□□□ 0.05
CPEB3Q8NE35 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPEB3Q8NE35 FAM220CP-201ENST00000395253 831 ntBASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms