Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 AC093010.1-201ENST00000473625 1624 ntBASIC19.87■□□□□ 0.77
RETREG2Q8NC44 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 AL356309.3-201ENST00000624132 1934 ntBASIC19.87■□□□□ 0.77
RETREG2Q8NC44 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 OR7E14P-202ENST00000530490 1290 ntBASIC19.87■□□□□ 0.77
RETREG2Q8NC44 SART3-203ENST00000546611 1184 ntBASIC19.87■□□□□ 0.77
RETREG2Q8NC44 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RETREG2Q8NC44 AC006116.8-202ENST00000587620 1550 ntBASIC19.87■□□□□ 0.77
RETREG2Q8NC44 KRT18P55-202ENST00000578578 1546 ntBASIC19.86■□□□□ 0.77
RETREG2Q8NC44 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 AC092910.1-201ENST00000482027 1129 ntBASIC19.86■□□□□ 0.77
RETREG2Q8NC44 IGHV3-22-201ENST00000520721 359 ntBASIC19.86■□□□□ 0.77
RETREG2Q8NC44 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RETREG2Q8NC44 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RETREG2Q8NC44 SIRPAP1-201ENST00000448467 1770 ntBASIC19.85■□□□□ 0.77
RETREG2Q8NC44 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RETREG2Q8NC44 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RETREG2Q8NC44 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RETREG2Q8NC44 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RETREG2Q8NC44 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RETREG2Q8NC44 AC022898.2-201ENST00000616822 1312 ntBASIC19.85■□□□□ 0.77
RETREG2Q8NC44 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RETREG2Q8NC44 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RETREG2Q8NC44 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RETREG2Q8NC44 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.85■□□□□ 0.77
RETREG2Q8NC44 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RETREG2Q8NC44 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RETREG2Q8NC44 MED15P5-201ENST00000423150 992 ntBASIC19.85■□□□□ 0.77
RETREG2Q8NC44 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.85■□□□□ 0.77
RETREG2Q8NC44 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RETREG2Q8NC44 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.85■□□□□ 0.77
RETREG2Q8NC44 FAM197Y3-203ENST00000618346 717 ntBASIC19.85■□□□□ 0.77
RETREG2Q8NC44 AL691403.2-201ENST00000618460 490 ntBASIC19.85■□□□□ 0.77
RETREG2Q8NC44 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RETREG2Q8NC44 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RETREG2Q8NC44 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RETREG2Q8NC44 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RETREG2Q8NC44 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RETREG2Q8NC44 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RETREG2Q8NC44 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RETREG2Q8NC44 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.85■□□□□ 0.77
RETREG2Q8NC44 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RETREG2Q8NC44 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms