Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
C3orf56Q8N813 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
C3orf56Q8N813 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
C3orf56Q8N813 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
C3orf56Q8N813 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
C3orf56Q8N813 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.71□□□□□ -0.21
C3orf56Q8N813 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.71□□□□□ -0.21
C3orf56Q8N813 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.71□□□□□ -0.21
C3orf56Q8N813 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
C3orf56Q8N813 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.71□□□□□ -0.21
C3orf56Q8N813 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.71□□□□□ -0.21
C3orf56Q8N813 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.71□□□□□ -0.21
C3orf56Q8N813 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
C3orf56Q8N813 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.71□□□□□ -0.21
C3orf56Q8N813 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.71□□□□□ -0.21
C3orf56Q8N813 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.71□□□□□ -0.21
C3orf56Q8N813 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.71□□□□□ -0.21
C3orf56Q8N813 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.71□□□□□ -0.21
C3orf56Q8N813 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.71□□□□□ -0.21
C3orf56Q8N813 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
C3orf56Q8N813 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
C3orf56Q8N813 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
C3orf56Q8N813 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
C3orf56Q8N813 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
C3orf56Q8N813 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
C3orf56Q8N813 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
C3orf56Q8N813 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
C3orf56Q8N813 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
C3orf56Q8N813 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
C3orf56Q8N813 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.22
C3orf56Q8N813 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
C3orf56Q8N813 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
C3orf56Q8N813 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
C3orf56Q8N813 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC13.71□□□□□ -0.22
C3orf56Q8N813 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
C3orf56Q8N813 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.71□□□□□ -0.22
C3orf56Q8N813 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC13.7□□□□□ -0.22
C3orf56Q8N813 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 LINC01006-201ENST00000333319 2292 ntBASIC13.7□□□□□ -0.22
C3orf56Q8N813 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
C3orf56Q8N813 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC13.7□□□□□ -0.22
C3orf56Q8N813 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 IGLL3P-201ENST00000412472 434 ntBASIC13.7□□□□□ -0.22
C3orf56Q8N813 AC096633.1-201ENST00000422446 749 ntBASIC13.7□□□□□ -0.22
C3orf56Q8N813 BASP1P1-201ENST00000430708 665 ntBASIC13.7□□□□□ -0.22
C3orf56Q8N813 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.7□□□□□ -0.22
C3orf56Q8N813 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.7□□□□□ -0.22
C3orf56Q8N813 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
C3orf56Q8N813 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.7□□□□□ -0.22
C3orf56Q8N813 AC109322.1-201ENST00000524499 1264 ntBASIC13.7□□□□□ -0.22
C3orf56Q8N813 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 AC087641.1-201ENST00000557561 1021 ntBASIC13.7□□□□□ -0.22
C3orf56Q8N813 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.7□□□□□ -0.22
C3orf56Q8N813 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.7□□□□□ -0.22
C3orf56Q8N813 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.7□□□□□ -0.22
C3orf56Q8N813 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
C3orf56Q8N813 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.7□□□□□ -0.22
C3orf56Q8N813 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC13.7□□□□□ -0.22
C3orf56Q8N813 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
C3orf56Q8N813 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
C3orf56Q8N813 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.7□□□□□ -0.22
C3orf56Q8N813 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
C3orf56Q8N813 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
C3orf56Q8N813 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C3orf56Q8N813 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
C3orf56Q8N813 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.69□□□□□ -0.22
C3orf56Q8N813 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C3orf56Q8N813 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.69□□□□□ -0.22
C3orf56Q8N813 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
C3orf56Q8N813 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms