Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39CQ8N584 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TTC39CQ8N584 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39CQ8N584 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39CQ8N584 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39CQ8N584 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
TTC39CQ8N584 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39CQ8N584 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39CQ8N584 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
TTC39CQ8N584 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39CQ8N584 PRYP5-201ENST00000451909 266 ntBASIC18.65■□□□□ 0.58
TTC39CQ8N584 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.65■□□□□ 0.58
TTC39CQ8N584 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.65■□□□□ 0.58
TTC39CQ8N584 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39CQ8N584 KRT126P-201ENST00000549467 1181 ntBASIC18.65■□□□□ 0.58
TTC39CQ8N584 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.65■□□□□ 0.58
TTC39CQ8N584 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39CQ8N584 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39CQ8N584 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39CQ8N584 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39CQ8N584 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39CQ8N584 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.65■□□□□ 0.58
TTC39CQ8N584 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.64■□□□□ 0.58
TTC39CQ8N584 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TTC39CQ8N584 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TTC39CQ8N584 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TTC39CQ8N584 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TTC39CQ8N584 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39CQ8N584 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
TTC39CQ8N584 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39CQ8N584 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.64■□□□□ 0.57
TTC39CQ8N584 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39CQ8N584 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39CQ8N584 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39CQ8N584 FAAHP1-202ENST00000446499 1238 ntBASIC18.64■□□□□ 0.57
TTC39CQ8N584 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.64■□□□□ 0.57
TTC39CQ8N584 AC008608.2-201ENST00000606089 416 ntBASIC18.64■□□□□ 0.57
TTC39CQ8N584 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.64■□□□□ 0.57
TTC39CQ8N584 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TTC39CQ8N584 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39CQ8N584 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TTC39CQ8N584 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39CQ8N584 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
TTC39CQ8N584 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39CQ8N584 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39CQ8N584 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39CQ8N584 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39CQ8N584 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TTC39CQ8N584 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.64■□□□□ 0.57
TTC39CQ8N584 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
TTC39CQ8N584 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39CQ8N584 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.63■□□□□ 0.57
TTC39CQ8N584 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39CQ8N584 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39CQ8N584 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.63■□□□□ 0.57
TTC39CQ8N584 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.63■□□□□ 0.57
TTC39CQ8N584 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39CQ8N584 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
TTC39CQ8N584 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39CQ8N584 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.63■□□□□ 0.57
TTC39CQ8N584 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39CQ8N584 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.63■□□□□ 0.57
TTC39CQ8N584 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39CQ8N584 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39CQ8N584 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39CQ8N584 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.63■□□□□ 0.57
TTC39CQ8N584 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39CQ8N584 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.63■□□□□ 0.57
TTC39CQ8N584 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.63■□□□□ 0.57
TTC39CQ8N584 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TTC39CQ8N584 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.63■□□□□ 0.57
TTC39CQ8N584 MTDHP3-201ENST00000594186 672 ntBASIC18.63■□□□□ 0.57
TTC39CQ8N584 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39CQ8N584 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TTC39CQ8N584 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TTC39CQ8N584 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.63■□□□□ 0.57
TTC39CQ8N584 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39CQ8N584 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.63■□□□□ 0.57
TTC39CQ8N584 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
TTC39CQ8N584 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39CQ8N584 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC39CQ8N584 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TTC39CQ8N584 AL356309.3-201ENST00000624132 1934 ntBASIC18.62■□□□□ 0.57
TTC39CQ8N584 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC39CQ8N584 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.62■□□□□ 0.57
TTC39CQ8N584 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.62■□□□□ 0.57
TTC39CQ8N584 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.62■□□□□ 0.57
TTC39CQ8N584 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC39CQ8N584 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC39CQ8N584 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
TTC39CQ8N584 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC39CQ8N584 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TTC39CQ8N584 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TTC39CQ8N584 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.62■□□□□ 0.57
TTC39CQ8N584 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.62■□□□□ 0.57
TTC39CQ8N584 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.62■□□□□ 0.57
TTC39CQ8N584 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC39CQ8N584 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
TTC39CQ8N584 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TTC39CQ8N584 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms