Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC25.7■■□□□ 1.71
ABCA6Q8N139 AL009183.1-201ENST00000603760 355 ntBASIC25.7■■□□□ 1.71
ABCA6Q8N139 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC25.7■■□□□ 1.71
ABCA6Q8N139 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.71
ABCA6Q8N139 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
ABCA6Q8N139 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC25.7■■□□□ 1.7
ABCA6Q8N139 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC25.7■■□□□ 1.7
ABCA6Q8N139 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ABCA6Q8N139 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ABCA6Q8N139 CROCCP3-202ENST00000420820 1947 ntBASIC25.7■■□□□ 1.7
ABCA6Q8N139 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC25.7■■□□□ 1.7
ABCA6Q8N139 AC046185.3-201ENST00000623228 1824 ntBASIC25.7■■□□□ 1.7
ABCA6Q8N139 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
ABCA6Q8N139 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC25.7■■□□□ 1.7
ABCA6Q8N139 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC25.7■■□□□ 1.7
ABCA6Q8N139 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC25.7■■□□□ 1.7
ABCA6Q8N139 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ABCA6Q8N139 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC25.69■■□□□ 1.7
ABCA6Q8N139 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC25.69■■□□□ 1.7
ABCA6Q8N139 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ABCA6Q8N139 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ABCA6Q8N139 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
ABCA6Q8N139 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
ABCA6Q8N139 TMPRSS11CP-201ENST00000453277 683 ntBASIC25.69■■□□□ 1.7
ABCA6Q8N139 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC25.69■■□□□ 1.7
ABCA6Q8N139 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC25.69■■□□□ 1.7
ABCA6Q8N139 LINC01225-203ENST00000563550 1244 ntBASIC25.69■■□□□ 1.7
ABCA6Q8N139 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC25.69■■□□□ 1.7
ABCA6Q8N139 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC25.69■■□□□ 1.7
ABCA6Q8N139 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC25.69■■□□□ 1.7
ABCA6Q8N139 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ABCA6Q8N139 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
ABCA6Q8N139 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ABCA6Q8N139 AMT-250ENST00000637682 1823 ntTSL 5 BASIC25.68■■□□□ 1.7
ABCA6Q8N139 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ABCA6Q8N139 CALY-202ENST00000368555 783 ntTSL 2 BASIC25.68■■□□□ 1.7
ABCA6Q8N139 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC25.68■■□□□ 1.7
ABCA6Q8N139 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC25.68■■□□□ 1.7
ABCA6Q8N139 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
ABCA6Q8N139 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC25.68■■□□□ 1.7
ABCA6Q8N139 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC25.68■■□□□ 1.7
ABCA6Q8N139 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC25.68■■□□□ 1.7
ABCA6Q8N139 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ABCA6Q8N139 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ABCA6Q8N139 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ABCA6Q8N139 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC25.68■■□□□ 1.7
ABCA6Q8N139 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC25.68■■□□□ 1.7
ABCA6Q8N139 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ABCA6Q8N139 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ABCA6Q8N139 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC25.67■■□□□ 1.7
ABCA6Q8N139 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
ABCA6Q8N139 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ABCA6Q8N139 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC25.67■■□□□ 1.7
ABCA6Q8N139 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC25.67■■□□□ 1.7
ABCA6Q8N139 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ABCA6Q8N139 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC25.67■■□□□ 1.7
ABCA6Q8N139 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ABCA6Q8N139 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ABCA6Q8N139 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ABCA6Q8N139 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA6Q8N139 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
ABCA6Q8N139 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC25.66■■□□□ 1.7
ABCA6Q8N139 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA6Q8N139 SPDYE7P-202ENST00000420373 878 ntBASIC25.66■■□□□ 1.7
ABCA6Q8N139 TSSK5P-201ENST00000423978 907 ntBASIC25.66■■□□□ 1.7
ABCA6Q8N139 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
ABCA6Q8N139 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA6Q8N139 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA6Q8N139 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA6Q8N139 AC097493.3-201ENST00000509725 367 ntBASIC25.66■■□□□ 1.7
ABCA6Q8N139 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA6Q8N139 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC25.66■■□□□ 1.7
ABCA6Q8N139 NOP2-220ENST00000545915 630 ntTSL 2 BASIC25.66■■□□□ 1.7
ABCA6Q8N139 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC25.66■■□□□ 1.7
ABCA6Q8N139 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC25.66■■□□□ 1.7
ABCA6Q8N139 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA6Q8N139 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA6Q8N139 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA6Q8N139 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC25.66■■□□□ 1.7
ABCA6Q8N139 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA6Q8N139 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA6Q8N139 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC25.66■■□□□ 1.7
ABCA6Q8N139 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA6Q8N139 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA6Q8N139 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC25.66■■□□□ 1.7
ABCA6Q8N139 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC25.66■■□□□ 1.7
ABCA6Q8N139 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
ABCA6Q8N139 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA6Q8N139 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA6Q8N139 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC25.66■■□□□ 1.7
ABCA6Q8N139 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC25.65■■□□□ 1.7
ABCA6Q8N139 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ABCA6Q8N139 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ABCA6Q8N139 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ABCA6Q8N139 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ABCA6Q8N139 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ABCA6Q8N139 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ABCA6Q8N139 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ABCA6Q8N139 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC25.65■■□□□ 1.7
ABCA6Q8N139 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms