Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 SLC25A1P2-201ENST00000430693 912 ntBASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 AL353719.1-201ENST00000566847 864 ntBASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM42Q8IWZ5 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 PCDHA14-201ENST00000506751 2298 ntBASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 BX088651.1-201ENST00000540551 451 ntBASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 AL023803.3-201ENST00000615559 522 ntBASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 REXO1L10P-201ENST00000615707 1290 ntBASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 REXO1L12P-201ENST00000622156 912 ntBASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 AC073912.3-201ENST00000624414 853 ntBASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 PCDHB19P-201ENST00000570871 2371 ntBASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM42Q8IWZ5 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 AP005242.2-201ENST00000580065 1175 ntBASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms