Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC83Q8IWF9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC83Q8IWF9 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC83Q8IWF9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC83Q8IWF9 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.63■□□□□ 0.89
CCDC83Q8IWF9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC83Q8IWF9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC83Q8IWF9 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.63■□□□□ 0.89
CCDC83Q8IWF9 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC83Q8IWF9 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC83Q8IWF9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC83Q8IWF9 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC83Q8IWF9 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC83Q8IWF9 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 TSPY22P-201ENST00000427496 604 ntBASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC83Q8IWF9 PKD1P1-201ENST00000458669 6805 ntBASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 AC060834.1-201ENST00000443027 2032 ntBASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 COX5BP2-201ENST00000392354 334 ntBASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 TMPOP1-202ENST00000424642 1267 ntBASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 AL845331.1-201ENST00000424978 1190 ntBASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 AC007967.3-201ENST00000434308 558 ntBASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 RN7SL606P-201ENST00000472779 293 ntBASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 AC016396.2-201ENST00000562575 1417 ntBASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC83Q8IWF9 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 AC097374.2-201ENST00000618617 1306 ntBASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 GUSBP12-201ENST00000513727 720 ntBASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 AL592071.1-201ENST00000611956 408 ntBASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 AC124864.1-201ENST00000623408 392 ntBASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC83Q8IWF9 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms