Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC60Q8IWA6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC60Q8IWA6 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.47■□□□□ 0.71
CCDC60Q8IWA6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC60Q8IWA6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC60Q8IWA6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC60Q8IWA6 AC023511.2-201ENST00000618803 211 ntBASIC19.47■□□□□ 0.71
CCDC60Q8IWA6 LINC01451-201ENST00000623792 534 ntBASIC19.47■□□□□ 0.71
CCDC60Q8IWA6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC60Q8IWA6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC60Q8IWA6 AL355312.1-201ENST00000407115 2176 ntBASIC19.47■□□□□ 0.71
CCDC60Q8IWA6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC60Q8IWA6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC60Q8IWA6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CCDC60Q8IWA6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC60Q8IWA6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC60Q8IWA6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC60Q8IWA6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC60Q8IWA6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CCDC60Q8IWA6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC60Q8IWA6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC60Q8IWA6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC60Q8IWA6 MIR940-201ENST00000401276 94 ntBASIC19.46■□□□□ 0.71
CCDC60Q8IWA6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC60Q8IWA6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CCDC60Q8IWA6 AC005593.1-201ENST00000624894 515 ntBASIC19.46■□□□□ 0.71
CCDC60Q8IWA6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC60Q8IWA6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
CCDC60Q8IWA6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC60Q8IWA6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC60Q8IWA6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC60Q8IWA6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC60Q8IWA6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CCDC60Q8IWA6 AC046185.3-201ENST00000623228 1824 ntBASIC19.46■□□□□ 0.71
CCDC60Q8IWA6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC60Q8IWA6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CCDC60Q8IWA6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC60Q8IWA6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC60Q8IWA6 AC007613.1-201ENST00000572811 2597 ntBASIC19.45■□□□□ 0.7
CCDC60Q8IWA6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
CCDC60Q8IWA6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CCDC60Q8IWA6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC60Q8IWA6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC60Q8IWA6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC60Q8IWA6 LINC00982-205ENST00000420957 435 ntBASIC19.45■□□□□ 0.7
CCDC60Q8IWA6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC60Q8IWA6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.45■□□□□ 0.7
CCDC60Q8IWA6 AC140113.2-201ENST00000604370 208 ntBASIC19.45■□□□□ 0.7
CCDC60Q8IWA6 AL139327.4-201ENST00000612362 153 ntBASIC19.45■□□□□ 0.7
CCDC60Q8IWA6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC60Q8IWA6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC60Q8IWA6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC60Q8IWA6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC60Q8IWA6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC60Q8IWA6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 AL353135.1-201ENST00000606729 504 ntBASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 PGM5P2-202ENST00000637225 1043 ntBASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC60Q8IWA6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
CCDC60Q8IWA6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
CCDC60Q8IWA6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC60Q8IWA6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC60Q8IWA6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC60Q8IWA6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC60Q8IWA6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC60Q8IWA6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CCDC60Q8IWA6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC60Q8IWA6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC60Q8IWA6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC60Q8IWA6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC60Q8IWA6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC60Q8IWA6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC60Q8IWA6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC60Q8IWA6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC60Q8IWA6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
CCDC60Q8IWA6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC60Q8IWA6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC60Q8IWA6 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms