Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.49□□□□□ -0.09
VPS13CQ709C8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS13CQ709C8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13CQ709C8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.49□□□□□ -0.09
VPS13CQ709C8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
VPS13CQ709C8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13CQ709C8 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS13CQ709C8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
VPS13CQ709C8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13CQ709C8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS13CQ709C8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
VPS13CQ709C8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS13CQ709C8 AC097493.3-201ENST00000509725 367 ntBASIC14.49□□□□□ -0.09
VPS13CQ709C8 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.49□□□□□ -0.09
VPS13CQ709C8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.49□□□□□ -0.09
VPS13CQ709C8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
VPS13CQ709C8 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.49□□□□□ -0.09
VPS13CQ709C8 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13CQ709C8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13CQ709C8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.49□□□□□ -0.09
VPS13CQ709C8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
VPS13CQ709C8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13CQ709C8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.49□□□□□ -0.09
VPS13CQ709C8 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13CQ709C8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13CQ709C8 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13CQ709C8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS13CQ709C8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.48□□□□□ -0.09
VPS13CQ709C8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS13CQ709C8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
VPS13CQ709C8 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.48□□□□□ -0.09
VPS13CQ709C8 KLF2P3-201ENST00000451977 1087 ntBASIC14.48□□□□□ -0.09
VPS13CQ709C8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VPS13CQ709C8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.48□□□□□ -0.09
VPS13CQ709C8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
VPS13CQ709C8 REXO1L3P-201ENST00000622202 1288 ntBASIC14.48□□□□□ -0.09
VPS13CQ709C8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS13CQ709C8 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VPS13CQ709C8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS13CQ709C8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.48□□□□□ -0.09
VPS13CQ709C8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS13CQ709C8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VPS13CQ709C8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VPS13CQ709C8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.48□□□□□ -0.09
VPS13CQ709C8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.48□□□□□ -0.09
VPS13CQ709C8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
VPS13CQ709C8 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VPS13CQ709C8 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.48□□□□□ -0.09
VPS13CQ709C8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.48□□□□□ -0.09
VPS13CQ709C8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
VPS13CQ709C8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.48□□□□□ -0.09
VPS13CQ709C8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
VPS13CQ709C8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS13CQ709C8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.48□□□□□ -0.09
VPS13CQ709C8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
VPS13CQ709C8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.48□□□□□ -0.09
VPS13CQ709C8 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS13CQ709C8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS13CQ709C8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
VPS13CQ709C8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.48□□□□□ -0.09
VPS13CQ709C8 FAM86GP-201ENST00000448322 971 ntBASIC14.48□□□□□ -0.09
VPS13CQ709C8 SPDYE11-202ENST00000450699 704 ntBASIC14.48□□□□□ -0.09
VPS13CQ709C8 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.48□□□□□ -0.09
VPS13CQ709C8 SPDYE9P-201ENST00000570642 692 ntBASIC14.48□□□□□ -0.09
VPS13CQ709C8 AL132655.2-201ENST00000596276 594 ntBASIC14.48□□□□□ -0.09
VPS13CQ709C8 SPDYE10P-202ENST00000612005 668 ntBASIC14.48□□□□□ -0.09
VPS13CQ709C8 SPDYE8P-202ENST00000612377 668 ntBASIC14.48□□□□□ -0.09
VPS13CQ709C8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.48□□□□□ -0.09
VPS13CQ709C8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS13CQ709C8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VPS13CQ709C8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.47□□□□□ -0.09
VPS13CQ709C8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VPS13CQ709C8 FAM58CP-201ENST00000435741 640 ntBASIC14.47□□□□□ -0.09
VPS13CQ709C8 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.47□□□□□ -0.09
VPS13CQ709C8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.47□□□□□ -0.09
VPS13CQ709C8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.47□□□□□ -0.09
VPS13CQ709C8 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS13CQ709C8 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VPS13CQ709C8 PI4KAP1-204ENST00000612579 1703 ntBASIC14.47□□□□□ -0.09
VPS13CQ709C8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VPS13CQ709C8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
VPS13CQ709C8 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS13CQ709C8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS13CQ709C8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS13CQ709C8 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS13CQ709C8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS13CQ709C8 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.47□□□□□ -0.09
VPS13CQ709C8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.47□□□□□ -0.09
VPS13CQ709C8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.47□□□□□ -0.09
VPS13CQ709C8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.47□□□□□ -0.09
VPS13CQ709C8 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VPS13CQ709C8 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS13CQ709C8 MIR6752-201ENST00000618442 71 ntBASIC14.47□□□□□ -0.09
VPS13CQ709C8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS13CQ709C8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.47□□□□□ -0.09
VPS13CQ709C8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VPS13CQ709C8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VPS13CQ709C8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS13CQ709C8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS13CQ709C8 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms