Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 AC068587.6-202ENST00000641839 5619 ntBASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 HLA-G-202ENST00000376815 851 ntBASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 HLA-G-203ENST00000376818 1127 ntBASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 AP003097.1-201ENST00000530657 1135 ntBASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 HEIH-201ENST00000623091 1652 ntBASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM88Q6PEY1 AL009178.2-201ENST00000597278 2719 ntBASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 AC018553.1-201ENST00000616682 1458 ntBASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 AC006058.3-201ENST00000606217 1069 ntBASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.21□□□□□ -0.13
TMEM88Q6PEY1 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TMEM88Q6PEY1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TMEM88Q6PEY1 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TMEM88Q6PEY1 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.21□□□□□ -0.14
TMEM88Q6PEY1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.21□□□□□ -0.14
TMEM88Q6PEY1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TMEM88Q6PEY1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TMEM88Q6PEY1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
TMEM88Q6PEY1 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TMEM88Q6PEY1 AC126177.1-201ENST00000547829 2218 ntBASIC14.21□□□□□ -0.14
TMEM88Q6PEY1 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TMEM88Q6PEY1 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM88Q6PEY1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM88Q6PEY1 AC060834.1-201ENST00000443027 2032 ntBASIC14.2□□□□□ -0.14
TMEM88Q6PEY1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM88Q6PEY1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms