Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
NIPAL3Q6P499 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.02■□□□□ 0.15
NIPAL3Q6P499 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NIPAL3Q6P499 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.02■□□□□ 0.15
NIPAL3Q6P499 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
NIPAL3Q6P499 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NIPAL3Q6P499 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NIPAL3Q6P499 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NIPAL3Q6P499 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NIPAL3Q6P499 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.01■□□□□ 0.15
NIPAL3Q6P499 AC009949.1-201ENST00000623048 1830 ntBASIC16.01■□□□□ 0.15
NIPAL3Q6P499 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NIPAL3Q6P499 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NIPAL3Q6P499 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
NIPAL3Q6P499 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NIPAL3Q6P499 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.01■□□□□ 0.15
NIPAL3Q6P499 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
NIPAL3Q6P499 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NIPAL3Q6P499 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.01■□□□□ 0.15
NIPAL3Q6P499 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.01■□□□□ 0.15
NIPAL3Q6P499 TSPY22P-201ENST00000427496 604 ntBASIC16.01■□□□□ 0.15
NIPAL3Q6P499 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.01■□□□□ 0.15
NIPAL3Q6P499 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.01■□□□□ 0.15
NIPAL3Q6P499 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NIPAL3Q6P499 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.01■□□□□ 0.15
NIPAL3Q6P499 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.01■□□□□ 0.15
NIPAL3Q6P499 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
NIPAL3Q6P499 AC116407.2-201ENST00000613639 860 ntBASIC16.01■□□□□ 0.15
NIPAL3Q6P499 LINC01451-201ENST00000623792 534 ntBASIC16.01■□□□□ 0.15
NIPAL3Q6P499 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.01■□□□□ 0.15
NIPAL3Q6P499 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
NIPAL3Q6P499 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NIPAL3Q6P499 IER3-202ENST00000376377 1350 ntBASIC16■□□□□ 0.15
NIPAL3Q6P499 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
NIPAL3Q6P499 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NIPAL3Q6P499 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
NIPAL3Q6P499 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
NIPAL3Q6P499 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16■□□□□ 0.15
NIPAL3Q6P499 REXO1L11P-201ENST00000620964 1927 ntBASIC16■□□□□ 0.15
NIPAL3Q6P499 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
NIPAL3Q6P499 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NIPAL3Q6P499 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16■□□□□ 0.15
NIPAL3Q6P499 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16■□□□□ 0.15
NIPAL3Q6P499 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16■□□□□ 0.15
NIPAL3Q6P499 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NIPAL3Q6P499 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
NIPAL3Q6P499 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16■□□□□ 0.15
NIPAL3Q6P499 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16■□□□□ 0.15
NIPAL3Q6P499 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NIPAL3Q6P499 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16■□□□□ 0.15
NIPAL3Q6P499 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NIPAL3Q6P499 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
NIPAL3Q6P499 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16■□□□□ 0.15
NIPAL3Q6P499 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NIPAL3Q6P499 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16■□□□□ 0.15
NIPAL3Q6P499 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16■□□□□ 0.15
NIPAL3Q6P499 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16■□□□□ 0.15
NIPAL3Q6P499 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16■□□□□ 0.15
NIPAL3Q6P499 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NIPAL3Q6P499 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NIPAL3Q6P499 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
NIPAL3Q6P499 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16■□□□□ 0.15
NIPAL3Q6P499 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NIPAL3Q6P499 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NIPAL3Q6P499 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NIPAL3Q6P499 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NIPAL3Q6P499 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NIPAL3Q6P499 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16■□□□□ 0.15
NIPAL3Q6P499 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16■□□□□ 0.15
NIPAL3Q6P499 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 KRT18P65-201ENST00000439811 1286 ntBASIC15.99■□□□□ 0.15
NIPAL3Q6P499 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.99■□□□□ 0.15
NIPAL3Q6P499 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.99■□□□□ 0.15
NIPAL3Q6P499 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms