Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CDC42BPAQ5VT25 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC26.26■■□□□ 1.79
CDC42BPAQ5VT25 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC26.26■■□□□ 1.79
CDC42BPAQ5VT25 AL139327.4-201ENST00000612362 153 ntBASIC26.26■■□□□ 1.79
CDC42BPAQ5VT25 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDC42BPAQ5VT25 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC26.26■■□□□ 1.79
CDC42BPAQ5VT25 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDC42BPAQ5VT25 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
CDC42BPAQ5VT25 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDC42BPAQ5VT25 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC26.26■■□□□ 1.79
CDC42BPAQ5VT25 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
CDC42BPAQ5VT25 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CDC42BPAQ5VT25 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
CDC42BPAQ5VT25 AC002056.1-201ENST00000395613 760 ntBASIC26.25■■□□□ 1.79
CDC42BPAQ5VT25 AC079140.1-201ENST00000508039 487 ntBASIC26.25■■□□□ 1.79
CDC42BPAQ5VT25 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC26.25■■□□□ 1.79
CDC42BPAQ5VT25 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC26.25■■□□□ 1.79
CDC42BPAQ5VT25 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CDC42BPAQ5VT25 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
CDC42BPAQ5VT25 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CDC42BPAQ5VT25 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CDC42BPAQ5VT25 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CDC42BPAQ5VT25 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
CDC42BPAQ5VT25 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CDC42BPAQ5VT25 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CDC42BPAQ5VT25 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC26.25■■□□□ 1.79
CDC42BPAQ5VT25 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CDC42BPAQ5VT25 CD81-202ENST00000381036 880 ntTSL 3 BASIC26.25■■□□□ 1.79
CDC42BPAQ5VT25 TFAMP1-201ENST00000412727 736 ntBASIC26.25■■□□□ 1.79
CDC42BPAQ5VT25 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC26.25■■□□□ 1.79
CDC42BPAQ5VT25 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
CDC42BPAQ5VT25 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC26.25■■□□□ 1.79
CDC42BPAQ5VT25 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CDC42BPAQ5VT25 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC26.25■■□□□ 1.79
CDC42BPAQ5VT25 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CDC42BPAQ5VT25 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC26.24■■□□□ 1.79
CDC42BPAQ5VT25 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
CDC42BPAQ5VT25 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
CDC42BPAQ5VT25 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CDC42BPAQ5VT25 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CDC42BPAQ5VT25 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC26.24■■□□□ 1.79
CDC42BPAQ5VT25 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC26.24■■□□□ 1.79
CDC42BPAQ5VT25 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC26.24■■□□□ 1.79
CDC42BPAQ5VT25 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC26.24■■□□□ 1.79
CDC42BPAQ5VT25 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC26.24■■□□□ 1.79
CDC42BPAQ5VT25 AL645728.2-201ENST00000641974 660 ntBASIC26.24■■□□□ 1.79
CDC42BPAQ5VT25 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
CDC42BPAQ5VT25 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CDC42BPAQ5VT25 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CDC42BPAQ5VT25 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC26.24■■□□□ 1.79
CDC42BPAQ5VT25 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC26.24■■□□□ 1.79
CDC42BPAQ5VT25 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
CDC42BPAQ5VT25 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
CDC42BPAQ5VT25 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
CDC42BPAQ5VT25 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
CDC42BPAQ5VT25 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
CDC42BPAQ5VT25 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
CDC42BPAQ5VT25 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CDC42BPAQ5VT25 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC26.23■■□□□ 1.79
CDC42BPAQ5VT25 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
CDC42BPAQ5VT25 AC243562.1-201ENST00000560672 389 ntBASIC26.23■■□□□ 1.79
CDC42BPAQ5VT25 INO80C-206ENST00000586489 594 ntTSL 3 BASIC26.23■■□□□ 1.79
CDC42BPAQ5VT25 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC26.23■■□□□ 1.79
CDC42BPAQ5VT25 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CDC42BPAQ5VT25 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
CDC42BPAQ5VT25 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC26.23■■□□□ 1.79
CDC42BPAQ5VT25 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDC42BPAQ5VT25 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDC42BPAQ5VT25 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDC42BPAQ5VT25 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDC42BPAQ5VT25 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDC42BPAQ5VT25 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC26.22■■□□□ 1.79
CDC42BPAQ5VT25 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
CDC42BPAQ5VT25 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC26.22■■□□□ 1.79
CDC42BPAQ5VT25 AL009183.1-201ENST00000603760 355 ntBASIC26.22■■□□□ 1.79
CDC42BPAQ5VT25 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC26.22■■□□□ 1.79
CDC42BPAQ5VT25 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDC42BPAQ5VT25 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CDC42BPAQ5VT25 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC26.22■■□□□ 1.79
CDC42BPAQ5VT25 AC090164.3-201ENST00000610780 2143 ntBASIC26.22■■□□□ 1.79
CDC42BPAQ5VT25 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDC42BPAQ5VT25 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDC42BPAQ5VT25 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDC42BPAQ5VT25 PMS2P4-201ENST00000412466 1052 ntBASIC26.22■■□□□ 1.79
CDC42BPAQ5VT25 NMU-203ENST00000507338 658 ntTSL 3 BASIC26.22■■□□□ 1.79
CDC42BPAQ5VT25 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC26.22■■□□□ 1.79
CDC42BPAQ5VT25 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 LYSMD4-203ENST00000378904 2122 ntBASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 GATB-205ENST00000508611 605 ntTSL 2 BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 DUX4L17-201ENST00000557360 1267 ntBASIC26.21■■□□□ 1.79
CDC42BPAQ5VT25 AC025678.2-201ENST00000562061 970 ntBASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms