Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.2□□□□□ -0.3
LINC01559Q495D7 AC010240.3-201ENST00000607688 395 ntBASIC13.2□□□□□ -0.3
LINC01559Q495D7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LINC01559Q495D7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01559Q495D7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01559Q495D7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01559Q495D7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC01559Q495D7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01559Q495D7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01559Q495D7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC01559Q495D7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
LINC01559Q495D7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01559Q495D7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01559Q495D7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LINC01559Q495D7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01559Q495D7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01559Q495D7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01559Q495D7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC01559Q495D7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01559Q495D7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01559Q495D7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01559Q495D7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01559Q495D7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01559Q495D7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC01559Q495D7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LINC01559Q495D7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
LINC01559Q495D7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
LINC01559Q495D7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.19□□□□□ -0.3
LINC01559Q495D7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC01559Q495D7 DDX43P3-201ENST00000441064 443 ntBASIC13.19□□□□□ -0.3
LINC01559Q495D7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.19□□□□□ -0.3
LINC01559Q495D7 AP000944.1-201ENST00000533886 564 ntTSL 4 BASIC13.19□□□□□ -0.3
LINC01559Q495D7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC01559Q495D7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 AL096869.2-202ENST00000557007 1237 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 AL353719.1-201ENST00000566847 864 ntBASIC13.19□□□□□ -0.3
LINC01559Q495D7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC13.19□□□□□ -0.3
LINC01559Q495D7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC01559Q495D7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 CLIC4P2-201ENST00000601934 717 ntBASIC13.19□□□□□ -0.3
LINC01559Q495D7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC01559Q495D7 AL023803.3-201ENST00000615559 522 ntBASIC13.19□□□□□ -0.3
LINC01559Q495D7 FAM197Y4-202ENST00000622692 608 ntBASIC13.19□□□□□ -0.3
LINC01559Q495D7 AC133485.6-201ENST00000624045 688 ntBASIC13.19□□□□□ -0.3
LINC01559Q495D7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC01559Q495D7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 LINC00167-201ENST00000530583 1419 ntBASIC13.19□□□□□ -0.3
LINC01559Q495D7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 AL139384.1-201ENST00000612143 3047 ntBASIC13.19□□□□□ -0.3
LINC01559Q495D7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC01559Q495D7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
LINC01559Q495D7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC01559Q495D7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC01559Q495D7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC01559Q495D7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01559Q495D7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01559Q495D7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC01559Q495D7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
LINC01559Q495D7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01559Q495D7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC01559Q495D7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC01559Q495D7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01559Q495D7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01559Q495D7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01559Q495D7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC01559Q495D7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01559Q495D7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01559Q495D7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC01559Q495D7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01559Q495D7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01559Q495D7 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
LINC01559Q495D7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01559Q495D7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01559Q495D7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC01559Q495D7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01559Q495D7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms