Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CDR2Q01850 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDR2Q01850 AC080080.1-201ENST00000625121 2420 ntBASIC18.72■□□□□ 0.59
CDR2Q01850 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDR2Q01850 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.72■□□□□ 0.59
CDR2Q01850 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDR2Q01850 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
CDR2Q01850 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDR2Q01850 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.71■□□□□ 0.59
CDR2Q01850 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CDR2Q01850 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.71■□□□□ 0.59
CDR2Q01850 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDR2Q01850 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.71■□□□□ 0.59
CDR2Q01850 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.71■□□□□ 0.59
CDR2Q01850 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDR2Q01850 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDR2Q01850 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDR2Q01850 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDR2Q01850 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.71■□□□□ 0.59
CDR2Q01850 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.71■□□□□ 0.59
CDR2Q01850 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.71■□□□□ 0.59
CDR2Q01850 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CDR2Q01850 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.71■□□□□ 0.59
CDR2Q01850 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CDR2Q01850 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.71■□□□□ 0.59
CDR2Q01850 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.71■□□□□ 0.59
CDR2Q01850 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.71■□□□□ 0.59
CDR2Q01850 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDR2Q01850 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDR2Q01850 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
CDR2Q01850 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.71■□□□□ 0.59
CDR2Q01850 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.71■□□□□ 0.59
CDR2Q01850 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CDR2Q01850 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDR2Q01850 PRORSD1P-202ENST00000563365 2154 ntBASIC18.71■□□□□ 0.59
CDR2Q01850 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDR2Q01850 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.71■□□□□ 0.58
CDR2Q01850 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDR2Q01850 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDR2Q01850 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CDR2Q01850 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDR2Q01850 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.7■□□□□ 0.58
CDR2Q01850 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CDR2Q01850 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDR2Q01850 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.7■□□□□ 0.58
CDR2Q01850 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CDR2Q01850 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CDR2Q01850 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CDR2Q01850 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.7■□□□□ 0.58
CDR2Q01850 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.7■□□□□ 0.58
CDR2Q01850 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDR2Q01850 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDR2Q01850 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDR2Q01850 TSSC2-201ENST00000450217 709 ntBASIC18.7■□□□□ 0.58
CDR2Q01850 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.7■□□□□ 0.58
CDR2Q01850 VENTXP7-201ENST00000475503 772 ntBASIC18.7■□□□□ 0.58
CDR2Q01850 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CDR2Q01850 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.7■□□□□ 0.58
CDR2Q01850 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.7■□□□□ 0.58
CDR2Q01850 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.7■□□□□ 0.58
CDR2Q01850 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDR2Q01850 AP005901.3-202ENST00000581653 237 ntBASIC18.7■□□□□ 0.58
CDR2Q01850 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CDR2Q01850 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDR2Q01850 AC106820.2-201ENST00000563775 3264 ntBASIC18.7■□□□□ 0.58
CDR2Q01850 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.7■□□□□ 0.58
CDR2Q01850 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDR2Q01850 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.7■□□□□ 0.58
CDR2Q01850 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.7■□□□□ 0.58
CDR2Q01850 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDR2Q01850 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.7■□□□□ 0.58
CDR2Q01850 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CDR2Q01850 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.7■□□□□ 0.58
CDR2Q01850 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.7■□□□□ 0.58
CDR2Q01850 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDR2Q01850 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CDR2Q01850 IER3-202ENST00000376377 1350 ntBASIC18.69■□□□□ 0.58
CDR2Q01850 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDR2Q01850 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CDR2Q01850 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDR2Q01850 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CDR2Q01850 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CDR2Q01850 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.69■□□□□ 0.58
CDR2Q01850 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDR2Q01850 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.69■□□□□ 0.58
CDR2Q01850 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDR2Q01850 MYCLP1-201ENST00000372451 1075 ntBASIC18.69■□□□□ 0.58
CDR2Q01850 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDR2Q01850 FAM220CP-201ENST00000395253 831 ntBASIC18.69■□□□□ 0.58
CDR2Q01850 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.69■□□□□ 0.58
CDR2Q01850 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDR2Q01850 IGHV3-52-201ENST00000519770 353 ntBASIC18.69■□□□□ 0.58
CDR2Q01850 AC109462.3-201ENST00000573934 613 ntBASIC18.69■□□□□ 0.58
CDR2Q01850 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
CDR2Q01850 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
CDR2Q01850 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDR2Q01850 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CDR2Q01850 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDR2Q01850 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDR2Q01850 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms