Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL20P78556 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL20P78556 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CCL20P78556 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL20P78556 AC022898.2-201ENST00000616822 1312 ntBASIC13.85□□□□□ -0.19
CCL20P78556 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CCL20P78556 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL20P78556 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CCL20P78556 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL20P78556 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL20P78556 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL20P78556 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL20P78556 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL20P78556 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL20P78556 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL20P78556 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL20P78556 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL20P78556 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL20P78556 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CCL20P78556 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL20P78556 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL20P78556 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL20P78556 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL20P78556 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL20P78556 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CCL20P78556 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL20P78556 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL20P78556 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.84□□□□□ -0.19
CCL20P78556 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CCL20P78556 AL050303.2-201ENST00000619798 666 ntBASIC13.84□□□□□ -0.19
CCL20P78556 AL445675.2-201ENST00000620291 557 ntBASIC13.84□□□□□ -0.19
CCL20P78556 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL20P78556 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL20P78556 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL20P78556 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL20P78556 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL20P78556 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CCL20P78556 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CCL20P78556 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL20P78556 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL20P78556 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL20P78556 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.84□□□□□ -0.19
CCL20P78556 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL20P78556 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL20P78556 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CCL20P78556 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL20P78556 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL20P78556 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL20P78556 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL20P78556 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.83□□□□□ -0.19
CCL20P78556 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
CCL20P78556 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCL20P78556 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCL20P78556 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.83□□□□□ -0.19
CCL20P78556 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.83□□□□□ -0.19
CCL20P78556 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL20P78556 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL20P78556 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL20P78556 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL20P78556 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL20P78556 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL20P78556 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL20P78556 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL20P78556 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL20P78556 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL20P78556 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL20P78556 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL20P78556 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CCL20P78556 RARRES2P10-201ENST00000564312 460 ntBASIC13.83□□□□□ -0.2
CCL20P78556 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.83□□□□□ -0.2
CCL20P78556 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.83□□□□□ -0.2
CCL20P78556 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL20P78556 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CCL20P78556 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL20P78556 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL20P78556 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL20P78556 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL20P78556 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL20P78556 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL20P78556 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL20P78556 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL20P78556 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CCL20P78556 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL20P78556 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL20P78556 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL20P78556 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CCL20P78556 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL20P78556 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL20P78556 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL20P78556 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL20P78556 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL20P78556 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL20P78556 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL20P78556 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL20P78556 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CCL20P78556 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL20P78556 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL20P78556 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL20P78556 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL20P78556 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms