Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEP78395 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEP78395 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.72■□□□□ 0.43
PRAMEP78395 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEP78395 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEP78395 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEP78395 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.71■□□□□ 0.43
PRAMEP78395 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEP78395 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.71■□□□□ 0.43
PRAMEP78395 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
PRAMEP78395 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEP78395 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEP78395 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEP78395 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.71■□□□□ 0.43
PRAMEP78395 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.71■□□□□ 0.43
PRAMEP78395 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEP78395 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEP78395 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEP78395 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PRAMEP78395 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEP78395 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEP78395 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.71■□□□□ 0.43
PRAMEP78395 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.71■□□□□ 0.43
PRAMEP78395 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PRAMEP78395 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEP78395 FAM86EP-206ENST00000510506 987 ntBASIC17.71■□□□□ 0.43
PRAMEP78395 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.71■□□□□ 0.43
PRAMEP78395 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PRAMEP78395 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.71■□□□□ 0.43
PRAMEP78395 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEP78395 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PRAMEP78395 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEP78395 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PRAMEP78395 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEP78395 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
PRAMEP78395 AC141586.5-201ENST00000624546 2050 ntBASIC17.71■□□□□ 0.43
PRAMEP78395 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEP78395 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PRAMEP78395 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEP78395 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEP78395 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEP78395 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEP78395 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEP78395 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEP78395 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEP78395 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
PRAMEP78395 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEP78395 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEP78395 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.7■□□□□ 0.42
PRAMEP78395 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEP78395 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEP78395 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEP78395 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEP78395 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEP78395 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.7■□□□□ 0.42
PRAMEP78395 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PRAMEP78395 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEP78395 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.7■□□□□ 0.42
PRAMEP78395 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.7■□□□□ 0.42
PRAMEP78395 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.7■□□□□ 0.42
PRAMEP78395 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.7■□□□□ 0.42
PRAMEP78395 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.7■□□□□ 0.42
PRAMEP78395 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.7■□□□□ 0.42
PRAMEP78395 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.7■□□□□ 0.42
PRAMEP78395 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEP78395 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.7■□□□□ 0.42
PRAMEP78395 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.7■□□□□ 0.42
PRAMEP78395 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.7■□□□□ 0.42
PRAMEP78395 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.7■□□□□ 0.42
PRAMEP78395 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEP78395 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.7■□□□□ 0.42
PRAMEP78395 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PRAMEP78395 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEP78395 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEP78395 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEP78395 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
PRAMEP78395 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEP78395 AC097374.2-201ENST00000618617 1306 ntBASIC17.7■□□□□ 0.42
PRAMEP78395 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.7■□□□□ 0.42
PRAMEP78395 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEP78395 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEP78395 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEP78395 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEP78395 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEP78395 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEP78395 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEP78395 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEP78395 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEP78395 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEP78395 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEP78395 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEP78395 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEP78395 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.69■□□□□ 0.42
PRAMEP78395 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.69■□□□□ 0.42
PRAMEP78395 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.69■□□□□ 0.42
PRAMEP78395 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.69■□□□□ 0.42
PRAMEP78395 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEP78395 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEP78395 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEP78395 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms