Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RCN1P2-201ENST00000398357 915 ntBASIC17.12■□□□□ 0.33
YBX1P67809 DUSP5P1-201ENST00000441325 1139 ntBASIC17.12■□□□□ 0.33
YBX1P67809 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
YBX1P67809 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.12■□□□□ 0.33
YBX1P67809 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.12■□□□□ 0.33
YBX1P67809 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
YBX1P67809 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
YBX1P67809 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
YBX1P67809 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
YBX1P67809 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
YBX1P67809 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.12■□□□□ 0.33
YBX1P67809 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
YBX1P67809 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
YBX1P67809 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
YBX1P67809 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.12■□□□□ 0.33
YBX1P67809 TP73-AS1-210ENST00000637775 1455 ntBASIC17.12■□□□□ 0.33
YBX1P67809 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
YBX1P67809 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
YBX1P67809 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
YBX1P67809 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
YBX1P67809 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.11■□□□□ 0.33
YBX1P67809 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
YBX1P67809 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
YBX1P67809 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
YBX1P67809 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
YBX1P67809 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
YBX1P67809 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
YBX1P67809 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
YBX1P67809 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
YBX1P67809 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.11■□□□□ 0.33
YBX1P67809 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
YBX1P67809 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.11■□□□□ 0.33
YBX1P67809 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
YBX1P67809 AC096633.1-201ENST00000422446 749 ntBASIC17.11■□□□□ 0.33
YBX1P67809 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.11■□□□□ 0.33
YBX1P67809 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.11■□□□□ 0.33
YBX1P67809 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.11■□□□□ 0.33
YBX1P67809 VENTXP7-201ENST00000475503 772 ntBASIC17.11■□□□□ 0.33
YBX1P67809 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.11■□□□□ 0.33
YBX1P67809 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.11■□□□□ 0.33
YBX1P67809 AL732292.2-201ENST00000609649 430 ntBASIC17.11■□□□□ 0.33
YBX1P67809 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
YBX1P67809 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.11■□□□□ 0.33
YBX1P67809 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
YBX1P67809 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
YBX1P67809 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.11■□□□□ 0.33
YBX1P67809 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
YBX1P67809 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
YBX1P67809 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
YBX1P67809 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
YBX1P67809 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.11■□□□□ 0.33
YBX1P67809 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YBX1P67809 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YBX1P67809 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
YBX1P67809 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.1■□□□□ 0.33
YBX1P67809 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
YBX1P67809 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
YBX1P67809 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
YBX1P67809 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YBX1P67809 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YBX1P67809 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.1■□□□□ 0.33
YBX1P67809 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.1■□□□□ 0.33
YBX1P67809 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
YBX1P67809 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YBX1P67809 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YBX1P67809 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YBX1P67809 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
YBX1P67809 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
YBX1P67809 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.1■□□□□ 0.33
YBX1P67809 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
YBX1P67809 AC096582.2-201ENST00000510860 516 ntBASIC17.1■□□□□ 0.33
YBX1P67809 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.1■□□□□ 0.33
YBX1P67809 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
YBX1P67809 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
YBX1P67809 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.1■□□□□ 0.33
YBX1P67809 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.1■□□□□ 0.33
YBX1P67809 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.1■□□□□ 0.33
YBX1P67809 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
YBX1P67809 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YBX1P67809 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YBX1P67809 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YBX1P67809 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.1■□□□□ 0.33
YBX1P67809 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YBX1P67809 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.1■□□□□ 0.33
YBX1P67809 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.1■□□□□ 0.33
YBX1P67809 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
YBX1P67809 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.1■□□□□ 0.33
YBX1P67809 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.09■□□□□ 0.33
YBX1P67809 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
YBX1P67809 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YBX1P67809 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
YBX1P67809 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YBX1P67809 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YBX1P67809 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YBX1P67809 NUS1P2-201ENST00000417358 873 ntBASIC17.09■□□□□ 0.33
YBX1P67809 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
YBX1P67809 UNC93B7-201ENST00000509439 705 ntBASIC17.09■□□□□ 0.33
YBX1P67809 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
YBX1P67809 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.09■□□□□ 0.33
YBX1P67809 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms