Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 AC004817.3-201ENST00000602957 2129 ntBASIC19.19■□□□□ 0.66
NCKAP1LP55160 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCKAP1LP55160 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NCKAP1LP55160 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCKAP1LP55160 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NCKAP1LP55160 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCKAP1LP55160 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.18■□□□□ 0.66
NCKAP1LP55160 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NCKAP1LP55160 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCKAP1LP55160 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.18■□□□□ 0.66
NCKAP1LP55160 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NCKAP1LP55160 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCKAP1LP55160 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCKAP1LP55160 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCKAP1LP55160 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NCKAP1LP55160 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NCKAP1LP55160 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
NCKAP1LP55160 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NCKAP1LP55160 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NCKAP1LP55160 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCKAP1LP55160 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NCKAP1LP55160 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCKAP1LP55160 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.18■□□□□ 0.66
NCKAP1LP55160 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NCKAP1LP55160 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NCKAP1LP55160 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.18■□□□□ 0.66
NCKAP1LP55160 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.18■□□□□ 0.66
NCKAP1LP55160 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.18■□□□□ 0.66
NCKAP1LP55160 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NCKAP1LP55160 AL022326.1-202ENST00000641533 845 ntBASIC19.18■□□□□ 0.66
NCKAP1LP55160 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCKAP1LP55160 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCKAP1LP55160 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
NCKAP1LP55160 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCKAP1LP55160 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.18■□□□□ 0.66
NCKAP1LP55160 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCKAP1LP55160 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCKAP1LP55160 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCKAP1LP55160 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
NCKAP1LP55160 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NCKAP1LP55160 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCKAP1LP55160 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.17■□□□□ 0.66
NCKAP1LP55160 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NCKAP1LP55160 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCKAP1LP55160 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NCKAP1LP55160 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NCKAP1LP55160 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCKAP1LP55160 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.17■□□□□ 0.66
NCKAP1LP55160 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCKAP1LP55160 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.17■□□□□ 0.66
NCKAP1LP55160 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.17■□□□□ 0.66
NCKAP1LP55160 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.17■□□□□ 0.66
NCKAP1LP55160 AP002469.2-201ENST00000531724 424 ntBASIC19.17■□□□□ 0.66
NCKAP1LP55160 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.17■□□□□ 0.66
NCKAP1LP55160 AC021087.4-201ENST00000563761 564 ntBASIC19.17■□□□□ 0.66
NCKAP1LP55160 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.17■□□□□ 0.66
NCKAP1LP55160 AC025062.2-201ENST00000605477 670 ntBASIC19.17■□□□□ 0.66
NCKAP1LP55160 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.17■□□□□ 0.66
NCKAP1LP55160 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NCKAP1LP55160 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NCKAP1LP55160 PP12613-201ENST00000424958 2230 ntBASIC19.17■□□□□ 0.66
NCKAP1LP55160 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCKAP1LP55160 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NCKAP1LP55160 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
NCKAP1LP55160 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.17■□□□□ 0.66
NCKAP1LP55160 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.17■□□□□ 0.66
NCKAP1LP55160 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCKAP1LP55160 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NCKAP1LP55160 AC005332.8-201ENST00000622750 2735 ntBASIC19.16■□□□□ 0.66
NCKAP1LP55160 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCKAP1LP55160 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
NCKAP1LP55160 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.16■□□□□ 0.66
NCKAP1LP55160 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCKAP1LP55160 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NCKAP1LP55160 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.16■□□□□ 0.66
NCKAP1LP55160 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
NCKAP1LP55160 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCKAP1LP55160 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCKAP1LP55160 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.16■□□□□ 0.66
NCKAP1LP55160 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.16■□□□□ 0.66
NCKAP1LP55160 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NCKAP1LP55160 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.16■□□□□ 0.66
NCKAP1LP55160 AL160237.2-201ENST00000556165 472 ntBASIC19.16■□□□□ 0.66
NCKAP1LP55160 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.16■□□□□ 0.66
NCKAP1LP55160 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCKAP1LP55160 AL135999.2-201ENST00000622438 1686 ntBASIC19.16■□□□□ 0.66
NCKAP1LP55160 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.16■□□□□ 0.66
NCKAP1LP55160 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
NCKAP1LP55160 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.16■□□□□ 0.66
NCKAP1LP55160 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.16■□□□□ 0.66
NCKAP1LP55160 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NCKAP1LP55160 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.15■□□□□ 0.66
NCKAP1LP55160 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCKAP1LP55160 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCKAP1LP55160 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCKAP1LP55160 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NCKAP1LP55160 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCKAP1LP55160 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NCKAP1LP55160 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCKAP1LP55160 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms