Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CLTCL1P53675 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
CLTCL1P53675 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
CLTCL1P53675 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC24.87■■□□□ 1.57
CLTCL1P53675 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CLTCL1P53675 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC24.87■■□□□ 1.57
CLTCL1P53675 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC24.87■■□□□ 1.57
CLTCL1P53675 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC24.87■■□□□ 1.57
CLTCL1P53675 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CLTCL1P53675 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CLTCL1P53675 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC24.87■■□□□ 1.57
CLTCL1P53675 AL645939.2-201ENST00000427340 991 ntBASIC24.87■■□□□ 1.57
CLTCL1P53675 AC140658.5-201ENST00000438532 169 ntBASIC24.87■■□□□ 1.57
CLTCL1P53675 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC24.87■■□□□ 1.57
CLTCL1P53675 AC109322.1-201ENST00000524499 1264 ntBASIC24.87■■□□□ 1.57
CLTCL1P53675 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC24.87■■□□□ 1.57
CLTCL1P53675 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CLTCL1P53675 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CLTCL1P53675 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CLTCL1P53675 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CLTCL1P53675 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CLTCL1P53675 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC24.86■■□□□ 1.57
CLTCL1P53675 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CLTCL1P53675 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CLTCL1P53675 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CLTCL1P53675 AC105339.1-204ENST00000636249 355 ntBASIC24.86■■□□□ 1.57
CLTCL1P53675 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CLTCL1P53675 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC24.86■■□□□ 1.57
CLTCL1P53675 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CLTCL1P53675 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC24.86■■□□□ 1.57
CLTCL1P53675 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CLTCL1P53675 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC24.86■■□□□ 1.57
CLTCL1P53675 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
CLTCL1P53675 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CLTCL1P53675 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
CLTCL1P53675 FAM185BP-201ENST00000443595 716 ntBASIC24.86■■□□□ 1.57
CLTCL1P53675 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC24.86■■□□□ 1.57
CLTCL1P53675 CCND1-203ENST00000536559 553 ntTSL 3 BASIC24.86■■□□□ 1.57
CLTCL1P53675 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC24.86■■□□□ 1.57
CLTCL1P53675 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CLTCL1P53675 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC24.86■■□□□ 1.57
CLTCL1P53675 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CLTCL1P53675 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
CLTCL1P53675 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC24.85■■□□□ 1.57
CLTCL1P53675 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
CLTCL1P53675 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
CLTCL1P53675 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CLTCL1P53675 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC24.85■■□□□ 1.57
CLTCL1P53675 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CLTCL1P53675 SPCS2P1-201ENST00000561636 679 ntBASIC24.85■■□□□ 1.57
CLTCL1P53675 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
CLTCL1P53675 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
CLTCL1P53675 REXO1L3P-201ENST00000622202 1288 ntBASIC24.85■■□□□ 1.57
CLTCL1P53675 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
CLTCL1P53675 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC24.84■■□□□ 1.57
CLTCL1P53675 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CLTCL1P53675 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC24.84■■□□□ 1.57
CLTCL1P53675 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CLTCL1P53675 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC24.84■■□□□ 1.57
CLTCL1P53675 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CLTCL1P53675 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC24.84■■□□□ 1.57
CLTCL1P53675 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC24.84■■□□□ 1.57
CLTCL1P53675 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
CLTCL1P53675 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC24.84■■□□□ 1.57
CLTCL1P53675 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CLTCL1P53675 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC24.84■■□□□ 1.57
CLTCL1P53675 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CLTCL1P53675 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC24.84■■□□□ 1.57
CLTCL1P53675 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CLTCL1P53675 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CLTCL1P53675 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC24.84■■□□□ 1.57
CLTCL1P53675 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CLTCL1P53675 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CLTCL1P53675 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CLTCL1P53675 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CLTCL1P53675 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CLTCL1P53675 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC24.83■■□□□ 1.57
CLTCL1P53675 LSM12-202ENST00000585388 942 ntTSL 3 BASIC24.83■■□□□ 1.57
CLTCL1P53675 AC129492.6-201ENST00000611383 1305 ntBASIC24.83■■□□□ 1.57
CLTCL1P53675 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC24.83■■□□□ 1.57
CLTCL1P53675 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC24.83■■□□□ 1.57
CLTCL1P53675 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC24.83■■□□□ 1.57
CLTCL1P53675 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC24.83■■□□□ 1.57
CLTCL1P53675 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
CLTCL1P53675 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC24.83■■□□□ 1.57
CLTCL1P53675 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC24.83■■□□□ 1.57
CLTCL1P53675 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CLTCL1P53675 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
CLTCL1P53675 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC24.83■■□□□ 1.56
CLTCL1P53675 AL627223.1-201ENST00000416693 442 ntBASIC24.83■■□□□ 1.56
CLTCL1P53675 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.56
CLTCL1P53675 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC24.83■■□□□ 1.56
CLTCL1P53675 AC112191.1-201ENST00000523689 701 ntBASIC24.83■■□□□ 1.56
CLTCL1P53675 MMP17-203ENST00000535004 719 ntTSL 3 BASIC24.83■■□□□ 1.56
CLTCL1P53675 LINC02084-201ENST00000606069 1096 ntBASIC24.83■■□□□ 1.56
CLTCL1P53675 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC24.82■■□□□ 1.56
CLTCL1P53675 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
CLTCL1P53675 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
CLTCL1P53675 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC24.82■■□□□ 1.56
CLTCL1P53675 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms