Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKAP51800 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKAP51800 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKAP51800 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCNKAP51800 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKAP51800 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CLCNKAP51800 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLCNKAP51800 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKAP51800 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCNKAP51800 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKAP51800 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.22■□□□□ 0.35
CLCNKAP51800 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKAP51800 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.22■□□□□ 0.35
CLCNKAP51800 SPDYE21P-201ENST00000413323 827 ntBASIC17.22■□□□□ 0.35
CLCNKAP51800 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.22■□□□□ 0.35
CLCNKAP51800 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLCNKAP51800 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKAP51800 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCNKAP51800 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKAP51800 AC109462.3-201ENST00000573934 613 ntBASIC17.22■□□□□ 0.35
CLCNKAP51800 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKAP51800 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKAP51800 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKAP51800 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKAP51800 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKAP51800 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
CLCNKAP51800 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.22■□□□□ 0.35
CLCNKAP51800 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.22■□□□□ 0.35
CLCNKAP51800 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKAP51800 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLCNKAP51800 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLCNKAP51800 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKAP51800 AC008764.6-201ENST00000595909 2069 ntBASIC17.22■□□□□ 0.35
CLCNKAP51800 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCNKAP51800 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKAP51800 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLCNKAP51800 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CLCNKAP51800 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKAP51800 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKAP51800 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLCNKAP51800 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKAP51800 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKAP51800 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.21■□□□□ 0.35
CLCNKAP51800 AC006116.8-202ENST00000587620 1550 ntBASIC17.21■□□□□ 0.35
CLCNKAP51800 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKAP51800 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKAP51800 RPS2P28-201ENST00000314255 741 ntBASIC17.21■□□□□ 0.35
CLCNKAP51800 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCNKAP51800 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCNKAP51800 MYCLP1-201ENST00000372451 1075 ntBASIC17.21■□□□□ 0.35
CLCNKAP51800 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLCNKAP51800 AL031284.1-201ENST00000419297 478 ntBASIC17.21■□□□□ 0.35
CLCNKAP51800 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.21■□□□□ 0.35
CLCNKAP51800 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCNKAP51800 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLCNKAP51800 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.21■□□□□ 0.35
CLCNKAP51800 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCNKAP51800 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.21■□□□□ 0.35
CLCNKAP51800 AP001005.1-201ENST00000571755 1248 ntBASIC17.21■□□□□ 0.35
CLCNKAP51800 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKAP51800 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKAP51800 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCNKAP51800 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKAP51800 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKAP51800 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKAP51800 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKAP51800 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CLCNKAP51800 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLCNKAP51800 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLCNKAP51800 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.21■□□□□ 0.34
CLCNKAP51800 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CLCNKAP51800 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCNKAP51800 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCNKAP51800 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCNKAP51800 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCNKAP51800 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCNKAP51800 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLCNKAP51800 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCNKAP51800 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCNKAP51800 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.2■□□□□ 0.34
CLCNKAP51800 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCNKAP51800 AC003669.1-201ENST00000334569 611 ntBASIC17.2■□□□□ 0.34
CLCNKAP51800 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCNKAP51800 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLCNKAP51800 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCNKAP51800 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLCNKAP51800 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CLCNKAP51800 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLCNKAP51800 IGHV3-52-201ENST00000519770 353 ntBASIC17.2■□□□□ 0.34
CLCNKAP51800 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCNKAP51800 STK25P1-201ENST00000585406 838 ntBASIC17.2■□□□□ 0.34
CLCNKAP51800 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.2■□□□□ 0.34
CLCNKAP51800 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLCNKAP51800 AL022326.1-202ENST00000641533 845 ntBASIC17.2■□□□□ 0.34
CLCNKAP51800 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLCNKAP51800 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
CLCNKAP51800 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCNKAP51800 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCNKAP51800 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCNKAP51800 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms