Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A6P48664 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC1A6P48664 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC1A6P48664 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
SLC1A6P48664 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.28■□□□□ 0.36
SLC1A6P48664 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SLC1A6P48664 TSPY7P-201ENST00000431358 1114 ntBASIC17.28■□□□□ 0.36
SLC1A6P48664 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.28■□□□□ 0.36
SLC1A6P48664 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
SLC1A6P48664 AL512604.3-201ENST00000569583 964 ntBASIC17.28■□□□□ 0.36
SLC1A6P48664 MIR4785-201ENST00000585005 73 ntBASIC17.28■□□□□ 0.36
SLC1A6P48664 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 AC024563.2-201ENST00000603282 481 ntBASIC17.28■□□□□ 0.36
SLC1A6P48664 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC1A6P48664 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SLC1A6P48664 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC1A6P48664 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SLC1A6P48664 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SLC1A6P48664 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC1A6P48664 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC1A6P48664 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SLC1A6P48664 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A6P48664 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SLC1A6P48664 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A6P48664 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A6P48664 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SLC1A6P48664 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A6P48664 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A6P48664 KRT89P-201ENST00000620027 1478 ntBASIC17.27■□□□□ 0.36
SLC1A6P48664 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC1A6P48664 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A6P48664 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A6P48664 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.27■□□□□ 0.36
SLC1A6P48664 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.27■□□□□ 0.36
SLC1A6P48664 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC1A6P48664 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.27■□□□□ 0.36
SLC1A6P48664 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC1A6P48664 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.27■□□□□ 0.36
SLC1A6P48664 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SLC1A6P48664 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC1A6P48664 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC1A6P48664 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC1A6P48664 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SLC1A6P48664 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SLC1A6P48664 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC1A6P48664 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC1A6P48664 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC1A6P48664 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SLC1A6P48664 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.27■□□□□ 0.35
SLC1A6P48664 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SLC1A6P48664 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
SLC1A6P48664 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.27■□□□□ 0.35
SLC1A6P48664 LINC02012-201ENST00000608206 1725 ntBASIC17.27■□□□□ 0.35
SLC1A6P48664 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A6P48664 DOC2GP-204ENST00000639052 2548 ntBASIC17.26■□□□□ 0.35
SLC1A6P48664 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A6P48664 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A6P48664 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SLC1A6P48664 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
SLC1A6P48664 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC1A6P48664 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A6P48664 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A6P48664 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC1A6P48664 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A6P48664 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A6P48664 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A6P48664 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A6P48664 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A6P48664 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC1A6P48664 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.26■□□□□ 0.35
SLC1A6P48664 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC1A6P48664 AL139327.4-201ENST00000612362 153 ntBASIC17.26■□□□□ 0.35
SLC1A6P48664 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A6P48664 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A6P48664 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
SLC1A6P48664 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A6P48664 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms