Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.82■□□□□ 0.76
TM4SF4P48230 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.82■□□□□ 0.76
TM4SF4P48230 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.82■□□□□ 0.76
TM4SF4P48230 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF4P48230 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF4P48230 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.82■□□□□ 0.76
TM4SF4P48230 SPTLC1P1-201ENST00000447199 261 ntBASIC19.82■□□□□ 0.76
TM4SF4P48230 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.82■□□□□ 0.76
TM4SF4P48230 AL009183.1-201ENST00000603760 355 ntBASIC19.82■□□□□ 0.76
TM4SF4P48230 AC004233.3-201ENST00000607794 1269 ntBASIC19.82■□□□□ 0.76
TM4SF4P48230 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF4P48230 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF4P48230 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.82■□□□□ 0.76
TM4SF4P48230 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF4P48230 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.82■□□□□ 0.76
TM4SF4P48230 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF4P48230 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF4P48230 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF4P48230 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.82■□□□□ 0.76
TM4SF4P48230 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF4P48230 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF4P48230 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.81■□□□□ 0.76
TM4SF4P48230 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
TM4SF4P48230 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF4P48230 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF4P48230 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF4P48230 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF4P48230 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF4P48230 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TM4SF4P48230 MIR346-201ENST00000362234 95 ntBASIC19.81■□□□□ 0.76
TM4SF4P48230 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TM4SF4P48230 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF4P48230 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF4P48230 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.81■□□□□ 0.76
TM4SF4P48230 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF4P48230 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF4P48230 PKD1P6-201ENST00000343738 4769 ntBASIC19.81■□□□□ 0.76
TM4SF4P48230 AC100757.3-201ENST00000622361 1406 ntBASIC19.81■□□□□ 0.76
TM4SF4P48230 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF4P48230 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TM4SF4P48230 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF4P48230 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.81■□□□□ 0.76
TM4SF4P48230 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.81■□□□□ 0.76
TM4SF4P48230 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TM4SF4P48230 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF4P48230 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
TM4SF4P48230 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF4P48230 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF4P48230 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.8■□□□□ 0.76
TM4SF4P48230 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.8■□□□□ 0.76
TM4SF4P48230 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.8■□□□□ 0.76
TM4SF4P48230 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF4P48230 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
TM4SF4P48230 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
TM4SF4P48230 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF4P48230 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF4P48230 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
TM4SF4P48230 IGHV3-71-201ENST00000523324 359 ntBASIC19.8■□□□□ 0.76
TM4SF4P48230 AC027369.6-201ENST00000525520 931 ntBASIC19.8■□□□□ 0.76
TM4SF4P48230 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.8■□□□□ 0.76
TM4SF4P48230 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.8■□□□□ 0.76
TM4SF4P48230 MIR4453-201ENST00000584019 89 ntBASIC19.8■□□□□ 0.76
TM4SF4P48230 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.8■□□□□ 0.76
TM4SF4P48230 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF4P48230 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF4P48230 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.8■□□□□ 0.76
TM4SF4P48230 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF4P48230 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF4P48230 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF4P48230 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF4P48230 AC093677.2-201ENST00000600169 1863 ntBASIC19.79■□□□□ 0.76
TM4SF4P48230 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TM4SF4P48230 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF4P48230 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TM4SF4P48230 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
TM4SF4P48230 AL096828.2-201ENST00000567259 1965 ntBASIC19.79■□□□□ 0.76
TM4SF4P48230 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.79■□□□□ 0.76
TM4SF4P48230 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF4P48230 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
TM4SF4P48230 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.79■□□□□ 0.76
TM4SF4P48230 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF4P48230 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF4P48230 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF4P48230 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.79■□□□□ 0.76
TM4SF4P48230 GPR53P-205ENST00000457298 1084 ntBASIC19.79■□□□□ 0.76
TM4SF4P48230 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.79■□□□□ 0.76
TM4SF4P48230 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.79■□□□□ 0.76
TM4SF4P48230 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
TM4SF4P48230 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF4P48230 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF4P48230 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF4P48230 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TM4SF4P48230 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TM4SF4P48230 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF4P48230 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF4P48230 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF4P48230 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.79■□□□□ 0.76
TM4SF4P48230 AC022144.1-201ENST00000602255 1580 ntBASIC19.78■□□□□ 0.76
TM4SF4P48230 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM4SF4P48230 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms