Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.68■□□□□ 0.42
CCNFP41002 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNFP41002 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNFP41002 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNFP41002 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.67■□□□□ 0.42
CCNFP41002 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCNFP41002 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNFP41002 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
CCNFP41002 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNFP41002 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNFP41002 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNFP41002 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CCNFP41002 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNFP41002 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNFP41002 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCNFP41002 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
CCNFP41002 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNFP41002 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNFP41002 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNFP41002 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.67■□□□□ 0.42
CCNFP41002 AL645929.1-201ENST00000420084 975 ntBASIC17.67■□□□□ 0.42
CCNFP41002 AGGF1P2-201ENST00000426656 2106 ntBASIC17.67■□□□□ 0.42
CCNFP41002 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNFP41002 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.67■□□□□ 0.42
CCNFP41002 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.67■□□□□ 0.42
CCNFP41002 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCNFP41002 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNFP41002 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.67■□□□□ 0.42
CCNFP41002 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNFP41002 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCNFP41002 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNFP41002 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNFP41002 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNFP41002 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNFP41002 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CCNFP41002 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNFP41002 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNFP41002 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
CCNFP41002 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNFP41002 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNFP41002 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCNFP41002 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNFP41002 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNFP41002 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.66■□□□□ 0.42
CCNFP41002 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNFP41002 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.66■□□□□ 0.42
CCNFP41002 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNFP41002 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNFP41002 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNFP41002 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNFP41002 AC106886.4-201ENST00000623557 2502 ntBASIC17.66■□□□□ 0.42
CCNFP41002 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCNFP41002 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCNFP41002 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCNFP41002 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCNFP41002 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNFP41002 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.66■□□□□ 0.42
CCNFP41002 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.66■□□□□ 0.42
CCNFP41002 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNFP41002 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNFP41002 IGHGP-201ENST00000390555 1178 ntBASIC17.66■□□□□ 0.42
CCNFP41002 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCNFP41002 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCNFP41002 SPDYE13P-201ENST00000445314 798 ntBASIC17.66■□□□□ 0.42
CCNFP41002 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.66■□□□□ 0.42
CCNFP41002 GPR32P1-201ENST00000601788 811 ntBASIC17.66■□□□□ 0.42
CCNFP41002 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNFP41002 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNFP41002 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCNFP41002 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNFP41002 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNFP41002 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCNFP41002 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNFP41002 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNFP41002 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCNFP41002 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
CCNFP41002 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCNFP41002 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.66■□□□□ 0.42
CCNFP41002 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CCNFP41002 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.66■□□□□ 0.42
CCNFP41002 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNFP41002 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNFP41002 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CCNFP41002 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNFP41002 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNFP41002 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.65■□□□□ 0.42
CCNFP41002 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNFP41002 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CCNFP41002 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNFP41002 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNFP41002 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCNFP41002 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNFP41002 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
CCNFP41002 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.65■□□□□ 0.42
CCNFP41002 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.65■□□□□ 0.42
CCNFP41002 MIR1224-201ENST00000408193 85 ntBASIC17.65■□□□□ 0.42
CCNFP41002 AC005104.2-201ENST00000427818 678 ntBASIC17.65■□□□□ 0.42
CCNFP41002 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.65■□□□□ 0.42
CCNFP41002 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.65■□□□□ 0.42
CCNFP41002 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms