Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.23■□□□□ 0.67
KRT9P35527 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT9P35527 AC106886.4-201ENST00000623557 2502 ntBASIC19.23■□□□□ 0.67
KRT9P35527 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KRT9P35527 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT9P35527 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KRT9P35527 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
KRT9P35527 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KRT9P35527 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT9P35527 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
KRT9P35527 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT9P35527 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT9P35527 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRT9P35527 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRT9P35527 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRT9P35527 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
KRT9P35527 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
KRT9P35527 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.22■□□□□ 0.67
KRT9P35527 AL118508.1-201ENST00000613502 2345 ntBASIC19.22■□□□□ 0.67
KRT9P35527 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT9P35527 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT9P35527 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRT9P35527 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.22■□□□□ 0.67
KRT9P35527 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRT9P35527 ZNF444P1-201ENST00000559497 298 ntBASIC19.22■□□□□ 0.67
KRT9P35527 LINC01238-205ENST00000567549 1107 ntBASIC19.22■□□□□ 0.67
KRT9P35527 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.22■□□□□ 0.67
KRT9P35527 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
KRT9P35527 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT9P35527 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT9P35527 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.22■□□□□ 0.67
KRT9P35527 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
KRT9P35527 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT9P35527 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRT9P35527 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRT9P35527 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.22■□□□□ 0.67
KRT9P35527 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.22■□□□□ 0.67
KRT9P35527 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT9P35527 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.22■□□□□ 0.67
KRT9P35527 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRT9P35527 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.21■□□□□ 0.67
KRT9P35527 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.21■□□□□ 0.67
KRT9P35527 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.21■□□□□ 0.67
KRT9P35527 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.21■□□□□ 0.67
KRT9P35527 HBZP1-201ENST00000354915 429 ntBASIC19.21■□□□□ 0.67
KRT9P35527 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
KRT9P35527 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
KRT9P35527 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.21■□□□□ 0.67
KRT9P35527 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.21■□□□□ 0.67
KRT9P35527 DUX4L26-201ENST00000489078 1255 ntBASIC19.21■□□□□ 0.67
KRT9P35527 KRT18P21-201ENST00000515767 1272 ntBASIC19.21■□□□□ 0.67
KRT9P35527 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.21■□□□□ 0.67
KRT9P35527 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.21■□□□□ 0.67
KRT9P35527 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.21■□□□□ 0.67
KRT9P35527 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.21■□□□□ 0.67
KRT9P35527 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.21■□□□□ 0.67
KRT9P35527 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.21■□□□□ 0.67
KRT9P35527 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
KRT9P35527 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
KRT9P35527 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
KRT9P35527 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT9P35527 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
KRT9P35527 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT9P35527 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT9P35527 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.2■□□□□ 0.66
KRT9P35527 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT9P35527 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.2■□□□□ 0.66
KRT9P35527 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT9P35527 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRT9P35527 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT9P35527 LINC01311-201ENST00000565162 1445 ntBASIC19.2■□□□□ 0.66
KRT9P35527 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT9P35527 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT9P35527 LYSMD4-203ENST00000378904 2122 ntBASIC19.2■□□□□ 0.66
KRT9P35527 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
KRT9P35527 AC022616.7-201ENST00000525383 220 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms