Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.24■□□□□ 0.35
BCKDHBP21953 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
BCKDHBP21953 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.24■□□□□ 0.35
BCKDHBP21953 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.24■□□□□ 0.35
BCKDHBP21953 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BCKDHBP21953 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
BCKDHBP21953 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BCKDHBP21953 FAM185BP-201ENST00000443595 716 ntBASIC17.24■□□□□ 0.35
BCKDHBP21953 PAWRP1-201ENST00000451083 565 ntBASIC17.24■□□□□ 0.35
BCKDHBP21953 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.24■□□□□ 0.35
BCKDHBP21953 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.24■□□□□ 0.35
BCKDHBP21953 AC025678.2-201ENST00000562061 970 ntBASIC17.24■□□□□ 0.35
BCKDHBP21953 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BCKDHBP21953 AC239800.4-201ENST00000603712 296 ntBASIC17.24■□□□□ 0.35
BCKDHBP21953 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BCKDHBP21953 ACTL9-202ENST00000612068 1252 ntBASIC17.24■□□□□ 0.35
BCKDHBP21953 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
BCKDHBP21953 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.24■□□□□ 0.35
BCKDHBP21953 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BCKDHBP21953 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
BCKDHBP21953 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BCKDHBP21953 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.24■□□□□ 0.35
BCKDHBP21953 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BCKDHBP21953 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
BCKDHBP21953 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BCKDHBP21953 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
BCKDHBP21953 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
BCKDHBP21953 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BCKDHBP21953 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BCKDHBP21953 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.23■□□□□ 0.35
BCKDHBP21953 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.23■□□□□ 0.35
BCKDHBP21953 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.23■□□□□ 0.35
BCKDHBP21953 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BCKDHBP21953 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
BCKDHBP21953 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.23■□□□□ 0.35
BCKDHBP21953 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
BCKDHBP21953 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BCKDHBP21953 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.23■□□□□ 0.35
BCKDHBP21953 AL513480.1-201ENST00000451731 511 ntBASIC17.23■□□□□ 0.35
BCKDHBP21953 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BCKDHBP21953 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.23■□□□□ 0.35
BCKDHBP21953 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
BCKDHBP21953 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.23■□□□□ 0.35
BCKDHBP21953 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.23■□□□□ 0.35
BCKDHBP21953 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
BCKDHBP21953 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BCKDHBP21953 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.23■□□□□ 0.35
BCKDHBP21953 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BCKDHBP21953 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.23■□□□□ 0.35
BCKDHBP21953 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.23■□□□□ 0.35
BCKDHBP21953 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
BCKDHBP21953 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.22■□□□□ 0.35
BCKDHBP21953 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
BCKDHBP21953 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BCKDHBP21953 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.22■□□□□ 0.35
BCKDHBP21953 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BCKDHBP21953 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BCKDHBP21953 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
BCKDHBP21953 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
BCKDHBP21953 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
BCKDHBP21953 AC135776.1-201ENST00000319817 2481 ntBASIC17.22■□□□□ 0.35
BCKDHBP21953 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BCKDHBP21953 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
BCKDHBP21953 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.22■□□□□ 0.35
BCKDHBP21953 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.22■□□□□ 0.35
BCKDHBP21953 AC092474.2-201ENST00000424288 719 ntBASIC17.22■□□□□ 0.35
BCKDHBP21953 ACTG1P4-201ENST00000425123 1122 ntBASIC17.22■□□□□ 0.35
BCKDHBP21953 ADH5P3-201ENST00000433842 1137 ntBASIC17.22■□□□□ 0.35
BCKDHBP21953 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
BCKDHBP21953 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
BCKDHBP21953 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BCKDHBP21953 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.22■□□□□ 0.35
BCKDHBP21953 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BCKDHBP21953 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.22■□□□□ 0.35
BCKDHBP21953 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.22■□□□□ 0.35
BCKDHBP21953 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.22■□□□□ 0.35
BCKDHBP21953 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.22■□□□□ 0.35
BCKDHBP21953 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
BCKDHBP21953 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.22■□□□□ 0.35
BCKDHBP21953 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BCKDHBP21953 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
BCKDHBP21953 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BCKDHBP21953 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
BCKDHBP21953 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
BCKDHBP21953 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.22■□□□□ 0.35
BCKDHBP21953 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BCKDHBP21953 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BCKDHBP21953 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
BCKDHBP21953 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BCKDHBP21953 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.21■□□□□ 0.35
BCKDHBP21953 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
BCKDHBP21953 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BCKDHBP21953 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.21■□□□□ 0.35
BCKDHBP21953 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BCKDHBP21953 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BCKDHBP21953 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.21■□□□□ 0.35
BCKDHBP21953 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
BCKDHBP21953 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
BCKDHBP21953 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.21■□□□□ 0.35
BCKDHBP21953 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms