Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NFKB1P19838 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.87■□□□□ 0.45
NFKB1P19838 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NFKB1P19838 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NFKB1P19838 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NFKB1P19838 NSUN5P1-202ENST00000421140 1535 ntBASIC17.87■□□□□ 0.45
NFKB1P19838 NSUN5P2-203ENST00000457352 1529 ntBASIC17.87■□□□□ 0.45
NFKB1P19838 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NFKB1P19838 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.87■□□□□ 0.45
NFKB1P19838 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.87■□□□□ 0.45
NFKB1P19838 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
NFKB1P19838 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
NFKB1P19838 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NFKB1P19838 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.86■□□□□ 0.45
NFKB1P19838 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.86■□□□□ 0.45
NFKB1P19838 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.86■□□□□ 0.45
NFKB1P19838 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NFKB1P19838 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.86■□□□□ 0.45
NFKB1P19838 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NFKB1P19838 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
NFKB1P19838 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NFKB1P19838 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.86■□□□□ 0.45
NFKB1P19838 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NFKB1P19838 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NFKB1P19838 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NFKB1P19838 MINOS1P3-201ENST00000457048 203 ntBASIC17.86■□□□□ 0.45
NFKB1P19838 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.86■□□□□ 0.45
NFKB1P19838 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.86■□□□□ 0.45
NFKB1P19838 AC074051.2-201ENST00000565115 352 ntBASIC17.86■□□□□ 0.45
NFKB1P19838 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.86■□□□□ 0.45
NFKB1P19838 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
NFKB1P19838 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.86■□□□□ 0.45
NFKB1P19838 AC093458.2-201ENST00000623150 629 ntBASIC17.86■□□□□ 0.45
NFKB1P19838 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.86■□□□□ 0.45
NFKB1P19838 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NFKB1P19838 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.86■□□□□ 0.45
NFKB1P19838 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.86■□□□□ 0.45
NFKB1P19838 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NFKB1P19838 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.86■□□□□ 0.45
NFKB1P19838 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.86■□□□□ 0.45
NFKB1P19838 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NFKB1P19838 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NFKB1P19838 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NFKB1P19838 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NFKB1P19838 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NFKB1P19838 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NFKB1P19838 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NFKB1P19838 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NFKB1P19838 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NFKB1P19838 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NFKB1P19838 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NFKB1P19838 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NFKB1P19838 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
NFKB1P19838 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NFKB1P19838 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
NFKB1P19838 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.85■□□□□ 0.45
NFKB1P19838 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NFKB1P19838 IGHV3-47-201ENST00000425060 335 ntBASIC17.85■□□□□ 0.45
NFKB1P19838 ATP5G2P1-201ENST00000433580 426 ntBASIC17.85■□□□□ 0.45
NFKB1P19838 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.85■□□□□ 0.45
NFKB1P19838 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.85■□□□□ 0.45
NFKB1P19838 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.85■□□□□ 0.45
NFKB1P19838 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.85■□□□□ 0.45
NFKB1P19838 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NFKB1P19838 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NFKB1P19838 AP000867.3-201ENST00000524675 377 ntBASIC17.85■□□□□ 0.45
NFKB1P19838 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NFKB1P19838 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.85■□□□□ 0.45
NFKB1P19838 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.85■□□□□ 0.45
NFKB1P19838 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.85■□□□□ 0.45
NFKB1P19838 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.85■□□□□ 0.45
NFKB1P19838 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.85■□□□□ 0.45
NFKB1P19838 BNIP3P18-201ENST00000593976 575 ntBASIC17.85■□□□□ 0.45
NFKB1P19838 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.85■□□□□ 0.45
NFKB1P19838 AC011467.2-201ENST00000598425 242 ntBASIC17.85■□□□□ 0.45
NFKB1P19838 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NFKB1P19838 TP73-AS1-210ENST00000637775 1455 ntBASIC17.85■□□□□ 0.45
NFKB1P19838 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NFKB1P19838 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
NFKB1P19838 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NFKB1P19838 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NFKB1P19838 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.84■□□□□ 0.45
NFKB1P19838 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NFKB1P19838 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
NFKB1P19838 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.84■□□□□ 0.45
NFKB1P19838 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NFKB1P19838 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.84■□□□□ 0.45
NFKB1P19838 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.84■□□□□ 0.45
NFKB1P19838 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
NFKB1P19838 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NFKB1P19838 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.84■□□□□ 0.45
NFKB1P19838 AL049757.1-201ENST00000616842 1596 ntBASIC17.84■□□□□ 0.45
NFKB1P19838 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NFKB1P19838 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
NFKB1P19838 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.84■□□□□ 0.45
NFKB1P19838 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NFKB1P19838 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.84■□□□□ 0.45
NFKB1P19838 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NFKB1P19838 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NFKB1P19838 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms