Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCNAP12004 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCNAP12004 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.14■□□□□ 0.33
PCNAP12004 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCNAP12004 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCNAP12004 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.14■□□□□ 0.33
PCNAP12004 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCNAP12004 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCNAP12004 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PCNAP12004 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCNAP12004 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.14■□□□□ 0.33
PCNAP12004 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCNAP12004 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCNAP12004 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.14■□□□□ 0.33
PCNAP12004 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCNAP12004 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.14■□□□□ 0.33
PCNAP12004 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCNAP12004 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PCNAP12004 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.14■□□□□ 0.33
PCNAP12004 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCNAP12004 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.14■□□□□ 0.33
PCNAP12004 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCNAP12004 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.14■□□□□ 0.33
PCNAP12004 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCNAP12004 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
PCNAP12004 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCNAP12004 AC124067.4-201ENST00000519691 2379 ntBASIC17.14■□□□□ 0.33
PCNAP12004 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCNAP12004 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.13■□□□□ 0.33
PCNAP12004 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCNAP12004 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCNAP12004 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCNAP12004 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCNAP12004 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCNAP12004 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCNAP12004 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCNAP12004 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PCNAP12004 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCNAP12004 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCNAP12004 TSPY22P-201ENST00000427496 604 ntBASIC17.13■□□□□ 0.33
PCNAP12004 AC068472.1-201ENST00000474589 881 ntBASIC17.13■□□□□ 0.33
PCNAP12004 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCNAP12004 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.13■□□□□ 0.33
PCNAP12004 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.13■□□□□ 0.33
PCNAP12004 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.13■□□□□ 0.33
PCNAP12004 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.13■□□□□ 0.33
PCNAP12004 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
PCNAP12004 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.13■□□□□ 0.33
PCNAP12004 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.13■□□□□ 0.33
PCNAP12004 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.13■□□□□ 0.33
PCNAP12004 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCNAP12004 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.13■□□□□ 0.33
PCNAP12004 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCNAP12004 AC022211.2-201ENST00000585075 2527 ntBASIC17.13■□□□□ 0.33
PCNAP12004 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.13■□□□□ 0.33
PCNAP12004 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCNAP12004 AD000864.1-201ENST00000624076 2295 ntBASIC17.13■□□□□ 0.33
PCNAP12004 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.13■□□□□ 0.33
PCNAP12004 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PCNAP12004 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCNAP12004 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCNAP12004 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCNAP12004 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
PCNAP12004 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCNAP12004 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCNAP12004 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
PCNAP12004 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCNAP12004 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCNAP12004 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCNAP12004 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
PCNAP12004 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCNAP12004 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCNAP12004 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCNAP12004 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCNAP12004 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.12■□□□□ 0.33
PCNAP12004 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PCNAP12004 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCNAP12004 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCNAP12004 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCNAP12004 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.12■□□□□ 0.33
PCNAP12004 AL031133.1-201ENST00000406807 723 ntBASIC17.12■□□□□ 0.33
PCNAP12004 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.12■□□□□ 0.33
PCNAP12004 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.12■□□□□ 0.33
PCNAP12004 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.12■□□□□ 0.33
PCNAP12004 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.12■□□□□ 0.33
PCNAP12004 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.12■□□□□ 0.33
PCNAP12004 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.12■□□□□ 0.33
PCNAP12004 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
PCNAP12004 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCNAP12004 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCNAP12004 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.12■□□□□ 0.33
PCNAP12004 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCNAP12004 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.12■□□□□ 0.33
PCNAP12004 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.12■□□□□ 0.33
PCNAP12004 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCNAP12004 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCNAP12004 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PCNAP12004 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PCNAP12004 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCNAP12004 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms