Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CALM3P0DP25 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CALM3P0DP25 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
CALM3P0DP25 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.38■□□□□ 0.85
CALM3P0DP25 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.38■□□□□ 0.85
CALM3P0DP25 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CALM3P0DP25 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.38■□□□□ 0.85
CALM3P0DP25 AL139288.1-201ENST00000623748 933 ntBASIC20.38■□□□□ 0.85
CALM3P0DP25 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.38■□□□□ 0.85
CALM3P0DP25 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CALM3P0DP25 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
CALM3P0DP25 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CALM3P0DP25 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CALM3P0DP25 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CALM3P0DP25 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CALM3P0DP25 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.37■□□□□ 0.85
CALM3P0DP25 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CALM3P0DP25 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.37■□□□□ 0.85
CALM3P0DP25 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.37■□□□□ 0.85
CALM3P0DP25 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CALM3P0DP25 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.37■□□□□ 0.85
CALM3P0DP25 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.37■□□□□ 0.85
CALM3P0DP25 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CALM3P0DP25 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CALM3P0DP25 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CALM3P0DP25 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.37■□□□□ 0.85
CALM3P0DP25 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CALM3P0DP25 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
CALM3P0DP25 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.37■□□□□ 0.85
CALM3P0DP25 SIGLEC30P-201ENST00000455569 941 ntBASIC20.37■□□□□ 0.85
CALM3P0DP25 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CALM3P0DP25 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.37■□□□□ 0.85
CALM3P0DP25 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CALM3P0DP25 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.37■□□□□ 0.85
CALM3P0DP25 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CALM3P0DP25 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
CALM3P0DP25 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CALM3P0DP25 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.37■□□□□ 0.85
CALM3P0DP25 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CALM3P0DP25 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CALM3P0DP25 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CALM3P0DP25 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CALM3P0DP25 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.37■□□□□ 0.85
CALM3P0DP25 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALM3P0DP25 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
CALM3P0DP25 AC016396.2-201ENST00000562575 1417 ntBASIC20.36■□□□□ 0.85
CALM3P0DP25 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALM3P0DP25 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.36■□□□□ 0.85
CALM3P0DP25 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALM3P0DP25 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
CALM3P0DP25 AL356309.3-201ENST00000624132 1934 ntBASIC20.36■□□□□ 0.85
CALM3P0DP25 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALM3P0DP25 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CALM3P0DP25 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.36■□□□□ 0.85
CALM3P0DP25 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALM3P0DP25 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.36■□□□□ 0.85
CALM3P0DP25 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
CALM3P0DP25 FGFR3P6-201ENST00000457012 610 ntBASIC20.36■□□□□ 0.85
CALM3P0DP25 SCARNA2-201ENST00000458748 420 ntBASIC20.36■□□□□ 0.85
CALM3P0DP25 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALM3P0DP25 AF238378.1-201ENST00000526806 358 ntBASIC20.36■□□□□ 0.85
CALM3P0DP25 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CALM3P0DP25 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CALM3P0DP25 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.36■□□□□ 0.85
CALM3P0DP25 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALM3P0DP25 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALM3P0DP25 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.36■□□□□ 0.85
CALM3P0DP25 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.36■□□□□ 0.85
CALM3P0DP25 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALM3P0DP25 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALM3P0DP25 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CALM3P0DP25 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CALM3P0DP25 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALM3P0DP25 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALM3P0DP25 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CALM3P0DP25 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CALM3P0DP25 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CALM3P0DP25 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CALM3P0DP25 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CALM3P0DP25 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CALM3P0DP25 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CALM3P0DP25 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CALM3P0DP25 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CALM3P0DP25 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.35■□□□□ 0.85
CALM3P0DP25 AC004870.1-201ENST00000315132 882 ntBASIC20.35■□□□□ 0.85
CALM3P0DP25 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.35■□□□□ 0.85
CALM3P0DP25 FAAHP1-202ENST00000446499 1238 ntBASIC20.35■□□□□ 0.85
CALM3P0DP25 PRYP5-201ENST00000451909 266 ntBASIC20.35■□□□□ 0.85
CALM3P0DP25 EMBP1-201ENST00000458200 901 ntBASIC20.35■□□□□ 0.85
CALM3P0DP25 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.35■□□□□ 0.85
CALM3P0DP25 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.35■□□□□ 0.85
CALM3P0DP25 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.35■□□□□ 0.85
CALM3P0DP25 RN7SL510P-201ENST00000581311 263 ntBASIC20.35■□□□□ 0.85
CALM3P0DP25 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.35■□□□□ 0.85
CALM3P0DP25 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CALM3P0DP25 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CALM3P0DP25 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CALM3P0DP25 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CALM3P0DP25 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CALM3P0DP25 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms