Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.22■□□□□ 0.67
CLTAP09496 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.22■□□□□ 0.67
CLTAP09496 AL121912.1-201ENST00000603683 238 ntBASIC19.22■□□□□ 0.67
CLTAP09496 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CLTAP09496 AC099398.1-201ENST00000567919 2776 ntBASIC19.22■□□□□ 0.67
CLTAP09496 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLTAP09496 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLTAP09496 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLTAP09496 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLTAP09496 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLTAP09496 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.22■□□□□ 0.67
CLTAP09496 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLTAP09496 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLTAP09496 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLTAP09496 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLTAP09496 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLTAP09496 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLTAP09496 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLTAP09496 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLTAP09496 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.21■□□□□ 0.67
CLTAP09496 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLTAP09496 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLTAP09496 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLTAP09496 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.21■□□□□ 0.67
CLTAP09496 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.21■□□□□ 0.67
CLTAP09496 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.21■□□□□ 0.67
CLTAP09496 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.21■□□□□ 0.67
CLTAP09496 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.21■□□□□ 0.67
CLTAP09496 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
CLTAP09496 AP005117.1-201ENST00000584346 1413 ntBASIC19.21■□□□□ 0.67
CLTAP09496 AC006116.8-202ENST00000587620 1550 ntBASIC19.21■□□□□ 0.67
CLTAP09496 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLTAP09496 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLTAP09496 AL031008.1-201ENST00000619963 541 ntBASIC19.21■□□□□ 0.67
CLTAP09496 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLTAP09496 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLTAP09496 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLTAP09496 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
CLTAP09496 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLTAP09496 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.21■□□□□ 0.67
CLTAP09496 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.2■□□□□ 0.66
CLTAP09496 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLTAP09496 AC067852.2-201ENST00000590513 2313 ntBASIC19.2■□□□□ 0.66
CLTAP09496 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.2■□□□□ 0.66
CLTAP09496 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLTAP09496 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLTAP09496 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CLTAP09496 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
CLTAP09496 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLTAP09496 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLTAP09496 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLTAP09496 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLTAP09496 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.2■□□□□ 0.66
CLTAP09496 AC079781.3-201ENST00000449110 356 ntBASIC19.2■□□□□ 0.66
CLTAP09496 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.2■□□□□ 0.66
CLTAP09496 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
CLTAP09496 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLTAP09496 AC104692.2-201ENST00000603054 253 ntBASIC19.2■□□□□ 0.66
CLTAP09496 AC008608.2-201ENST00000606089 416 ntBASIC19.2■□□□□ 0.66
CLTAP09496 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.2■□□□□ 0.66
CLTAP09496 AL355877.3-201ENST00000622820 899 ntBASIC19.2■□□□□ 0.66
CLTAP09496 AP000867.4-201ENST00000641616 219 ntBASIC19.2■□□□□ 0.66
CLTAP09496 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLTAP09496 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLTAP09496 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CLTAP09496 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLTAP09496 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLTAP09496 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.2■□□□□ 0.66
CLTAP09496 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.2■□□□□ 0.66
CLTAP09496 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLTAP09496 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.2■□□□□ 0.66
CLTAP09496 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.2■□□□□ 0.66
CLTAP09496 AC012317.2-201ENST00000623305 2251 ntBASIC19.2■□□□□ 0.66
CLTAP09496 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLTAP09496 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.19■□□□□ 0.66
CLTAP09496 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLTAP09496 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLTAP09496 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLTAP09496 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLTAP09496 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.19■□□□□ 0.66
CLTAP09496 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLTAP09496 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLTAP09496 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.19■□□□□ 0.66
CLTAP09496 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CLTAP09496 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CLTAP09496 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLTAP09496 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLTAP09496 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.19■□□□□ 0.66
CLTAP09496 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.19■□□□□ 0.66
CLTAP09496 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.19■□□□□ 0.66
CLTAP09496 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.19■□□□□ 0.66
CLTAP09496 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.19■□□□□ 0.66
CLTAP09496 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.19■□□□□ 0.66
CLTAP09496 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.19■□□□□ 0.66
CLTAP09496 MTDHP3-201ENST00000594186 672 ntBASIC19.19■□□□□ 0.66
CLTAP09496 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLTAP09496 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CLTAP09496 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CLTAP09496 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLTAP09496 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms