Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD48P09326 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD48P09326 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.19■□□□□ 0.5
CD48P09326 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.19■□□□□ 0.5
CD48P09326 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CD48P09326 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD48P09326 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD48P09326 ARMC10P1-201ENST00000313754 855 ntBASIC18.19■□□□□ 0.5
CD48P09326 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD48P09326 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CD48P09326 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.19■□□□□ 0.5
CD48P09326 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD48P09326 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.19■□□□□ 0.5
CD48P09326 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD48P09326 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.19■□□□□ 0.5
CD48P09326 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.19■□□□□ 0.5
CD48P09326 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.19■□□□□ 0.5
CD48P09326 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CD48P09326 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD48P09326 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CD48P09326 AC009053.2-201ENST00000563701 2365 ntBASIC18.19■□□□□ 0.5
CD48P09326 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CD48P09326 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CD48P09326 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CD48P09326 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CD48P09326 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD48P09326 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.18■□□□□ 0.5
CD48P09326 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD48P09326 PRORSD1P-202ENST00000563365 2154 ntBASIC18.18■□□□□ 0.5
CD48P09326 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD48P09326 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CD48P09326 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD48P09326 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CD48P09326 KRT8P10-201ENST00000450021 1447 ntBASIC18.18■□□□□ 0.5
CD48P09326 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
CD48P09326 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CD48P09326 MIR1224-201ENST00000408193 85 ntBASIC18.18■□□□□ 0.5
CD48P09326 LINC00265-3P-201ENST00000447588 903 ntBASIC18.18■□□□□ 0.5
CD48P09326 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.18■□□□□ 0.5
CD48P09326 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.18■□□□□ 0.5
CD48P09326 AC122714.2-201ENST00000502787 707 ntBASIC18.18■□□□□ 0.5
CD48P09326 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.18■□□□□ 0.5
CD48P09326 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CD48P09326 NPAP1P7-201ENST00000613027 823 ntBASIC18.18■□□□□ 0.5
CD48P09326 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.18■□□□□ 0.5
CD48P09326 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD48P09326 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.18■□□□□ 0.5
CD48P09326 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.18■□□□□ 0.5
CD48P09326 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD48P09326 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD48P09326 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD48P09326 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD48P09326 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CD48P09326 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
CD48P09326 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.18■□□□□ 0.5
CD48P09326 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CD48P09326 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD48P09326 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD48P09326 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD48P09326 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD48P09326 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD48P09326 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CD48P09326 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD48P09326 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CD48P09326 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CD48P09326 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
CD48P09326 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CD48P09326 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CD48P09326 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CD48P09326 FAM220CP-201ENST00000395253 831 ntBASIC18.17■□□□□ 0.5
CD48P09326 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.17■□□□□ 0.5
CD48P09326 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CD48P09326 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.17■□□□□ 0.5
CD48P09326 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.17■□□□□ 0.5
CD48P09326 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CD48P09326 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CD48P09326 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.17■□□□□ 0.5
CD48P09326 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
CD48P09326 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.17■□□□□ 0.5
CD48P09326 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD48P09326 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.17■□□□□ 0.5
CD48P09326 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD48P09326 AC090340.1-201ENST00000620778 4980 ntBASIC18.17■□□□□ 0.5
CD48P09326 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CD48P09326 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD48P09326 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD48P09326 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD48P09326 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CD48P09326 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CD48P09326 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.17■□□□□ 0.5
CD48P09326 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD48P09326 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD48P09326 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD48P09326 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CD48P09326 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CD48P09326 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CD48P09326 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CD48P09326 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CD48P09326 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CD48P09326 KRT17P6-201ENST00000453795 1220 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms