Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.16■□□□□ 0.18
THBS1P07996 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THBS1P07996 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.16■□□□□ 0.18
THBS1P07996 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.16■□□□□ 0.18
THBS1P07996 AC103564.2-201ENST00000432853 1299 ntBASIC16.16■□□□□ 0.18
THBS1P07996 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
THBS1P07996 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
THBS1P07996 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
THBS1P07996 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
THBS1P07996 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.16■□□□□ 0.18
THBS1P07996 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.16■□□□□ 0.18
THBS1P07996 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.16■□□□□ 0.18
THBS1P07996 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.16■□□□□ 0.18
THBS1P07996 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
THBS1P07996 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
THBS1P07996 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.16■□□□□ 0.18
THBS1P07996 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
THBS1P07996 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
THBS1P07996 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THBS1P07996 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
THBS1P07996 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THBS1P07996 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.16■□□□□ 0.18
THBS1P07996 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.16■□□□□ 0.18
THBS1P07996 AC005332.1-201ENST00000577698 1310 ntBASIC16.16■□□□□ 0.18
THBS1P07996 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
THBS1P07996 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
THBS1P07996 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
THBS1P07996 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THBS1P07996 IER3-202ENST00000376377 1350 ntBASIC16.15■□□□□ 0.18
THBS1P07996 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
THBS1P07996 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THBS1P07996 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
THBS1P07996 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.15■□□□□ 0.18
THBS1P07996 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
THBS1P07996 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
THBS1P07996 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
THBS1P07996 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THBS1P07996 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THBS1P07996 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THBS1P07996 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THBS1P07996 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THBS1P07996 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
THBS1P07996 FAM220CP-201ENST00000395253 831 ntBASIC16.15■□□□□ 0.18
THBS1P07996 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
THBS1P07996 VENTXP7-201ENST00000475503 772 ntBASIC16.15■□□□□ 0.18
THBS1P07996 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
THBS1P07996 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.15■□□□□ 0.18
THBS1P07996 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.15■□□□□ 0.18
THBS1P07996 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.15■□□□□ 0.18
THBS1P07996 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.15■□□□□ 0.18
THBS1P07996 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.15■□□□□ 0.18
THBS1P07996 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
THBS1P07996 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.15■□□□□ 0.18
THBS1P07996 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THBS1P07996 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.15■□□□□ 0.18
THBS1P07996 AC080080.1-201ENST00000625121 2420 ntBASIC16.15■□□□□ 0.18
THBS1P07996 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.15■□□□□ 0.18
THBS1P07996 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
THBS1P07996 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.14■□□□□ 0.18
THBS1P07996 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
THBS1P07996 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THBS1P07996 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
THBS1P07996 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.14■□□□□ 0.17
THBS1P07996 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.14■□□□□ 0.17
THBS1P07996 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.14■□□□□ 0.17
THBS1P07996 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.14■□□□□ 0.17
THBS1P07996 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
THBS1P07996 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
THBS1P07996 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
THBS1P07996 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THBS1P07996 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THBS1P07996 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
THBS1P07996 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
THBS1P07996 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
THBS1P07996 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THBS1P07996 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THBS1P07996 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
THBS1P07996 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.14■□□□□ 0.17
THBS1P07996 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THBS1P07996 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.14■□□□□ 0.17
THBS1P07996 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
THBS1P07996 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.14■□□□□ 0.17
THBS1P07996 BX276092.5-203ENST00000456199 560 ntBASIC16.14■□□□□ 0.17
THBS1P07996 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.14■□□□□ 0.17
THBS1P07996 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.14■□□□□ 0.17
THBS1P07996 AC109462.3-201ENST00000573934 613 ntBASIC16.14■□□□□ 0.17
THBS1P07996 AL121672.3-201ENST00000608644 468 ntBASIC16.14■□□□□ 0.17
THBS1P07996 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
THBS1P07996 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.14■□□□□ 0.17
THBS1P07996 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.14■□□□□ 0.17
THBS1P07996 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
THBS1P07996 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
THBS1P07996 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THBS1P07996 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THBS1P07996 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.14■□□□□ 0.17
THBS1P07996 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
THBS1P07996 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
THBS1P07996 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.14■□□□□ 0.17
THBS1P07996 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.14■□□□□ 0.17
THBS1P07996 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms