Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
POLR3DP05423 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.99■□□□□ 0.95
POLR3DP05423 OR7E14P-202ENST00000530490 1290 ntBASIC20.99■□□□□ 0.95
POLR3DP05423 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.99■□□□□ 0.95
POLR3DP05423 AC139887.3-201ENST00000568585 713 ntBASIC20.99■□□□□ 0.95
POLR3DP05423 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR3DP05423 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.99■□□□□ 0.95
POLR3DP05423 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
POLR3DP05423 AC073592.5-201ENST00000624854 528 ntBASIC20.99■□□□□ 0.95
POLR3DP05423 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
POLR3DP05423 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
POLR3DP05423 AC079776.2-201ENST00000641154 1609 ntBASIC20.99■□□□□ 0.95
POLR3DP05423 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.99■□□□□ 0.95
POLR3DP05423 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR3DP05423 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.99■□□□□ 0.95
POLR3DP05423 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR3DP05423 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
POLR3DP05423 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR3DP05423 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
POLR3DP05423 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
POLR3DP05423 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
POLR3DP05423 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.98■□□□□ 0.95
POLR3DP05423 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
POLR3DP05423 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR3DP05423 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.98■□□□□ 0.95
POLR3DP05423 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR3DP05423 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR3DP05423 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR3DP05423 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR3DP05423 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.98■□□□□ 0.95
POLR3DP05423 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR3DP05423 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
POLR3DP05423 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.98■□□□□ 0.95
POLR3DP05423 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR3DP05423 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.98■□□□□ 0.95
POLR3DP05423 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
POLR3DP05423 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.98■□□□□ 0.95
POLR3DP05423 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.98■□□□□ 0.95
POLR3DP05423 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
POLR3DP05423 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.98■□□□□ 0.95
POLR3DP05423 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
POLR3DP05423 AC025062.2-201ENST00000605477 670 ntBASIC20.98■□□□□ 0.95
POLR3DP05423 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.98■□□□□ 0.95
POLR3DP05423 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
POLR3DP05423 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.98■□□□□ 0.95
POLR3DP05423 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR3DP05423 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
POLR3DP05423 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR3DP05423 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR3DP05423 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR3DP05423 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR3DP05423 FLJ13224-201ENST00000313737 1514 ntBASIC20.98■□□□□ 0.95
POLR3DP05423 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
POLR3DP05423 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR3DP05423 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
POLR3DP05423 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR3DP05423 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
POLR3DP05423 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR3DP05423 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.98■□□□□ 0.95
POLR3DP05423 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.97■□□□□ 0.95
POLR3DP05423 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.97■□□□□ 0.95
POLR3DP05423 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
POLR3DP05423 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR3DP05423 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR3DP05423 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR3DP05423 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.97■□□□□ 0.95
POLR3DP05423 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
POLR3DP05423 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.97■□□□□ 0.95
POLR3DP05423 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
POLR3DP05423 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.97■□□□□ 0.95
POLR3DP05423 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR3DP05423 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR3DP05423 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR3DP05423 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR3DP05423 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
POLR3DP05423 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.97■□□□□ 0.95
POLR3DP05423 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.97■□□□□ 0.95
POLR3DP05423 DDX43P3-201ENST00000441064 443 ntBASIC20.97■□□□□ 0.95
POLR3DP05423 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.97■□□□□ 0.95
POLR3DP05423 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.97■□□□□ 0.95
POLR3DP05423 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR3DP05423 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.97■□□□□ 0.95
POLR3DP05423 AC116407.3-201ENST00000623905 1129 ntBASIC20.97■□□□□ 0.95
POLR3DP05423 AF228730.7-201ENST00000641842 219 ntBASIC20.97■□□□□ 0.95
POLR3DP05423 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.97■□□□□ 0.95
POLR3DP05423 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR3DP05423 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
POLR3DP05423 BX276092.7-203ENST00000637198 1536 ntBASIC20.97■□□□□ 0.95
POLR3DP05423 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.97■□□□□ 0.95
POLR3DP05423 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR3DP05423 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.97■□□□□ 0.95
POLR3DP05423 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
POLR3DP05423 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
POLR3DP05423 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR3DP05423 AC004817.3-201ENST00000602957 2129 ntBASIC20.96■□□□□ 0.95
POLR3DP05423 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
POLR3DP05423 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR3DP05423 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR3DP05423 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
POLR3DP05423 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms