Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
PDGFAP04085 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFAP04085 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.43■□□□□ 0.22
PDGFAP04085 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFAP04085 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFAP04085 AC004967.1-201ENST00000453589 447 ntBASIC16.43■□□□□ 0.22
PDGFAP04085 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.43■□□□□ 0.22
PDGFAP04085 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.43■□□□□ 0.22
PDGFAP04085 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
PDGFAP04085 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.43■□□□□ 0.22
PDGFAP04085 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.43■□□□□ 0.22
PDGFAP04085 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.43■□□□□ 0.22
PDGFAP04085 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFAP04085 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.43■□□□□ 0.22
PDGFAP04085 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.43■□□□□ 0.22
PDGFAP04085 AP000867.4-201ENST00000641616 219 ntBASIC16.43■□□□□ 0.22
PDGFAP04085 AC134684.3-201ENST00000641758 218 ntBASIC16.43■□□□□ 0.22
PDGFAP04085 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFAP04085 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.43■□□□□ 0.22
PDGFAP04085 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.43■□□□□ 0.22
PDGFAP04085 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFAP04085 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
PDGFAP04085 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.43■□□□□ 0.22
PDGFAP04085 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.43■□□□□ 0.22
PDGFAP04085 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.43■□□□□ 0.22
PDGFAP04085 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFAP04085 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFAP04085 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFAP04085 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFAP04085 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.43■□□□□ 0.22
PDGFAP04085 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFAP04085 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.43■□□□□ 0.22
PDGFAP04085 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PDGFAP04085 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFAP04085 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PDGFAP04085 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFAP04085 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PDGFAP04085 AC067852.2-201ENST00000590513 2313 ntBASIC16.42■□□□□ 0.22
PDGFAP04085 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFAP04085 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFAP04085 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
PDGFAP04085 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFAP04085 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
PDGFAP04085 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFAP04085 AL354751.1-201ENST00000412768 1863 ntBASIC16.42■□□□□ 0.22
PDGFAP04085 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.42■□□□□ 0.22
PDGFAP04085 AC084018.2-201ENST00000613093 2607 ntBASIC16.42■□□□□ 0.22
PDGFAP04085 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.42■□□□□ 0.22
PDGFAP04085 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFAP04085 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFAP04085 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFAP04085 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PDGFAP04085 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.42■□□□□ 0.22
PDGFAP04085 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFAP04085 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.42■□□□□ 0.22
PDGFAP04085 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PDGFAP04085 AC023274.1-201ENST00000418278 595 ntBASIC16.42■□□□□ 0.22
PDGFAP04085 AC009947.1-201ENST00000444350 727 ntBASIC16.42■□□□□ 0.22
PDGFAP04085 AC112698.1-201ENST00000510299 916 ntBASIC16.42■□□□□ 0.22
PDGFAP04085 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.42■□□□□ 0.22
PDGFAP04085 MIR3687-2-201ENST00000577708 61 ntBASIC16.42■□□□□ 0.22
PDGFAP04085 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFAP04085 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.42■□□□□ 0.22
PDGFAP04085 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.42■□□□□ 0.22
PDGFAP04085 MIR3687-1-201ENST00000614492 61 ntBASIC16.42■□□□□ 0.22
PDGFAP04085 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PDGFAP04085 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFAP04085 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFAP04085 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFAP04085 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFAP04085 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PDGFAP04085 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFAP04085 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFAP04085 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFAP04085 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.42■□□□□ 0.22
PDGFAP04085 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFAP04085 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFAP04085 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PDGFAP04085 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFAP04085 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PDGFAP04085 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFAP04085 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFAP04085 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PDGFAP04085 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PDGFAP04085 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFAP04085 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFAP04085 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFAP04085 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.41■□□□□ 0.22
PDGFAP04085 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFAP04085 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFAP04085 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFAP04085 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
PDGFAP04085 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.41■□□□□ 0.22
PDGFAP04085 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFAP04085 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFAP04085 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFAP04085 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFAP04085 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.41■□□□□ 0.22
PDGFAP04085 DNAJB3-201ENST00000446806 729 ntBASIC16.41■□□□□ 0.22
PDGFAP04085 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms