Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21■□□□□ 0.95
COL1A1P02452 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC21■□□□□ 0.95
COL1A1P02452 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
COL1A1P02452 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COL1A1P02452 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
COL1A1P02452 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21■□□□□ 0.95
COL1A1P02452 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL1A1P02452 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL1A1P02452 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21■□□□□ 0.95
COL1A1P02452 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL1A1P02452 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL1A1P02452 PNMT-202ENST00000394246 821 ntTSL 2 BASIC21■□□□□ 0.95
COL1A1P02452 MRPL20P1-201ENST00000400819 433 ntBASIC21■□□□□ 0.95
COL1A1P02452 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL1A1P02452 MIR3197-201ENST00000582241 73 ntBASIC21■□□□□ 0.95
COL1A1P02452 CYB561-216ENST00000582297 897 ntTSL 3 BASIC21■□□□□ 0.95
COL1A1P02452 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC21■□□□□ 0.95
COL1A1P02452 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC21■□□□□ 0.95
COL1A1P02452 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL1A1P02452 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21■□□□□ 0.95
COL1A1P02452 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21■□□□□ 0.95
COL1A1P02452 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A1P02452 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A1P02452 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A1P02452 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.99■□□□□ 0.95
COL1A1P02452 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A1P02452 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.99■□□□□ 0.95
COL1A1P02452 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A1P02452 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A1P02452 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
COL1A1P02452 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A1P02452 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A1P02452 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A1P02452 CNN2P11-201ENST00000429351 262 ntBASIC20.99■□□□□ 0.95
COL1A1P02452 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.99■□□□□ 0.95
COL1A1P02452 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
COL1A1P02452 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A1P02452 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A1P02452 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A1P02452 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A1P02452 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.99■□□□□ 0.95
COL1A1P02452 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.99■□□□□ 0.95
COL1A1P02452 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A1P02452 AC008764.6-201ENST00000595909 2069 ntBASIC20.99■□□□□ 0.95
COL1A1P02452 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.99■□□□□ 0.95
COL1A1P02452 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL1A1P02452 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL1A1P02452 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.98■□□□□ 0.95
COL1A1P02452 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL1A1P02452 ELL2P1-201ENST00000413990 1906 ntBASIC20.98■□□□□ 0.95
COL1A1P02452 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL1A1P02452 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
COL1A1P02452 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
COL1A1P02452 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL1A1P02452 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL1A1P02452 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL1A1P02452 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.98■□□□□ 0.95
COL1A1P02452 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.98■□□□□ 0.95
COL1A1P02452 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL1A1P02452 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
COL1A1P02452 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.98■□□□□ 0.95
COL1A1P02452 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.98■□□□□ 0.95
COL1A1P02452 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
COL1A1P02452 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.98■□□□□ 0.95
COL1A1P02452 LINC01451-201ENST00000623792 534 ntBASIC20.98■□□□□ 0.95
COL1A1P02452 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
COL1A1P02452 AC120498.9-201ENST00000339021 3867 ntBASIC20.98■□□□□ 0.95
COL1A1P02452 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL1A1P02452 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
COL1A1P02452 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL1A1P02452 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A1P02452 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A1P02452 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
COL1A1P02452 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A1P02452 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A1P02452 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A1P02452 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A1P02452 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
COL1A1P02452 HTR5BP-201ENST00000430851 1154 ntBASIC20.97■□□□□ 0.95
COL1A1P02452 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A1P02452 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.97■□□□□ 0.95
COL1A1P02452 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.97■□□□□ 0.95
COL1A1P02452 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.97■□□□□ 0.95
COL1A1P02452 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.97■□□□□ 0.95
COL1A1P02452 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
COL1A1P02452 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A1P02452 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A1P02452 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.97■□□□□ 0.95
COL1A1P02452 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
COL1A1P02452 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A1P02452 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.97■□□□□ 0.95
COL1A1P02452 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
COL1A1P02452 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A1P02452 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
COL1A1P02452 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL1A1P02452 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL1A1P02452 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.96■□□□□ 0.95
COL1A1P02452 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.96■□□□□ 0.95
COL1A1P02452 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL1A1P02452 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms