Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LDLRP01130 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
LDLRP01130 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17■□□□□ 0.31
LDLRP01130 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17■□□□□ 0.31
LDLRP01130 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LDLRP01130 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
LDLRP01130 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LDLRP01130 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LDLRP01130 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17■□□□□ 0.31
LDLRP01130 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17■□□□□ 0.31
LDLRP01130 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LDLRP01130 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LDLRP01130 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LDLRP01130 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LDLRP01130 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LDLRP01130 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17■□□□□ 0.31
LDLRP01130 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LDLRP01130 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17■□□□□ 0.31
LDLRP01130 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17■□□□□ 0.31
LDLRP01130 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17■□□□□ 0.31
LDLRP01130 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17■□□□□ 0.31
LDLRP01130 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LDLRP01130 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17■□□□□ 0.31
LDLRP01130 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17■□□□□ 0.31
LDLRP01130 MIR3180-1-201ENST00000580374 94 ntBASIC17■□□□□ 0.31
LDLRP01130 MIR3180-3-201ENST00000584616 94 ntBASIC17■□□□□ 0.31
LDLRP01130 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
LDLRP01130 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17■□□□□ 0.31
LDLRP01130 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
LDLRP01130 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
LDLRP01130 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LDLRP01130 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LDLRP01130 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17■□□□□ 0.31
LDLRP01130 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LDLRP01130 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17■□□□□ 0.31
LDLRP01130 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LDLRP01130 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
LDLRP01130 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDLRP01130 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDLRP01130 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDLRP01130 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LDLRP01130 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDLRP01130 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDLRP01130 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.99■□□□□ 0.31
LDLRP01130 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDLRP01130 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LDLRP01130 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDLRP01130 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDLRP01130 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.99■□□□□ 0.31
LDLRP01130 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDLRP01130 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
LDLRP01130 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.99■□□□□ 0.31
LDLRP01130 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.99■□□□□ 0.31
LDLRP01130 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
LDLRP01130 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LDLRP01130 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.99■□□□□ 0.31
LDLRP01130 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.99■□□□□ 0.31
LDLRP01130 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDLRP01130 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDLRP01130 AL121672.3-201ENST00000608644 468 ntBASIC16.99■□□□□ 0.31
LDLRP01130 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LDLRP01130 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LDLRP01130 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDLRP01130 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.99■□□□□ 0.31
LDLRP01130 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDLRP01130 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDLRP01130 AL355312.1-201ENST00000407115 2176 ntBASIC16.99■□□□□ 0.31
LDLRP01130 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.99■□□□□ 0.31
LDLRP01130 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LDLRP01130 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDLRP01130 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDLRP01130 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LDLRP01130 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LDLRP01130 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDLRP01130 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.99■□□□□ 0.31
LDLRP01130 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
LDLRP01130 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDLRP01130 AL138688.1-201ENST00000624851 1594 ntBASIC16.98■□□□□ 0.31
LDLRP01130 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.98■□□□□ 0.31
LDLRP01130 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDLRP01130 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDLRP01130 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.98■□□□□ 0.31
LDLRP01130 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LDLRP01130 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDLRP01130 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDLRP01130 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDLRP01130 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDLRP01130 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDLRP01130 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDLRP01130 MIR564-202ENST00000385049 94 ntBASIC16.98■□□□□ 0.31
LDLRP01130 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDLRP01130 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LDLRP01130 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.98■□□□□ 0.31
LDLRP01130 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
LDLRP01130 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.98■□□□□ 0.31
LDLRP01130 NUS1P1-201ENST00000446295 882 ntBASIC16.98■□□□□ 0.31
LDLRP01130 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.98■□□□□ 0.31
LDLRP01130 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.98■□□□□ 0.31
LDLRP01130 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.98■□□□□ 0.31
LDLRP01130 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms