Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.88■□□□□ 0.77
ALDH1A1P00352 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALDH1A1P00352 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALDH1A1P00352 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALDH1A1P00352 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.87■□□□□ 0.77
ALDH1A1P00352 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALDH1A1P00352 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.87■□□□□ 0.77
ALDH1A1P00352 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.87■□□□□ 0.77
ALDH1A1P00352 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.87■□□□□ 0.77
ALDH1A1P00352 AC087163.2-201ENST00000457299 853 ntBASIC19.87■□□□□ 0.77
ALDH1A1P00352 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
ALDH1A1P00352 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALDH1A1P00352 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ALDH1A1P00352 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.87■□□□□ 0.77
ALDH1A1P00352 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ALDH1A1P00352 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALDH1A1P00352 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.87■□□□□ 0.77
ALDH1A1P00352 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALDH1A1P00352 UXT-AS1-201ENST00000590504 1525 ntBASIC19.86■□□□□ 0.77
ALDH1A1P00352 AC100803.2-201ENST00000562459 1963 ntBASIC19.86■□□□□ 0.77
ALDH1A1P00352 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALDH1A1P00352 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALDH1A1P00352 COX5BP8-201ENST00000416911 349 ntBASIC19.86■□□□□ 0.77
ALDH1A1P00352 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.86■□□□□ 0.77
ALDH1A1P00352 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALDH1A1P00352 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.86■□□□□ 0.77
ALDH1A1P00352 RN7SL692P-201ENST00000464677 288 ntBASIC19.86■□□□□ 0.77
ALDH1A1P00352 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.86■□□□□ 0.77
ALDH1A1P00352 LINC01225-203ENST00000563550 1244 ntBASIC19.86■□□□□ 0.77
ALDH1A1P00352 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
ALDH1A1P00352 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ALDH1A1P00352 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ALDH1A1P00352 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALDH1A1P00352 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ALDH1A1P00352 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
ALDH1A1P00352 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALDH1A1P00352 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALDH1A1P00352 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALDH1A1P00352 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.85■□□□□ 0.77
ALDH1A1P00352 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALDH1A1P00352 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALDH1A1P00352 SLC25A24-204ENST00000569674 2357 ntBASIC19.85■□□□□ 0.77
ALDH1A1P00352 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALDH1A1P00352 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ALDH1A1P00352 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
ALDH1A1P00352 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.85■□□□□ 0.77
ALDH1A1P00352 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ALDH1A1P00352 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALDH1A1P00352 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALDH1A1P00352 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALDH1A1P00352 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALDH1A1P00352 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ALDH1A1P00352 SERBP1P5-201ENST00000510079 1181 ntBASIC19.85■□□□□ 0.77
ALDH1A1P00352 MIR4515-201ENST00000584082 81 ntBASIC19.85■□□□□ 0.77
ALDH1A1P00352 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
ALDH1A1P00352 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALDH1A1P00352 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.85■□□□□ 0.77
ALDH1A1P00352 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALDH1A1P00352 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ALDH1A1P00352 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
ALDH1A1P00352 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALDH1A1P00352 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ALDH1A1P00352 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.85■□□□□ 0.77
ALDH1A1P00352 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALDH1A1P00352 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALDH1A1P00352 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.84■□□□□ 0.77
ALDH1A1P00352 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.84■□□□□ 0.77
ALDH1A1P00352 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ALDH1A1P00352 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ALDH1A1P00352 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.84■□□□□ 0.77
ALDH1A1P00352 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ALDH1A1P00352 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ALDH1A1P00352 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ALDH1A1P00352 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ALDH1A1P00352 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ALDH1A1P00352 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ALDH1A1P00352 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ALDH1A1P00352 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ALDH1A1P00352 AC241585.1-201ENST00000433527 519 ntBASIC19.84■□□□□ 0.77
ALDH1A1P00352 ATP5G2P4-201ENST00000442175 420 ntBASIC19.84■□□□□ 0.77
ALDH1A1P00352 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.84■□□□□ 0.77
ALDH1A1P00352 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.84■□□□□ 0.77
ALDH1A1P00352 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.84■□□□□ 0.77
ALDH1A1P00352 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.84■□□□□ 0.77
ALDH1A1P00352 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.84■□□□□ 0.77
ALDH1A1P00352 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ALDH1A1P00352 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ALDH1A1P00352 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
ALDH1A1P00352 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ALDH1A1P00352 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ALDH1A1P00352 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.84■□□□□ 0.77
ALDH1A1P00352 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ALDH1A1P00352 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
ALDH1A1P00352 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ALDH1A1P00352 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
ALDH1A1P00352 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.83■□□□□ 0.77
ALDH1A1P00352 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.83■□□□□ 0.77
ALDH1A1P00352 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.83■□□□□ 0.77
ALDH1A1P00352 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ALDH1A1P00352 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms