Protein–RNA interactions for Protein: O60888

CUTA, Protein CutA, humanhuman

Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUTAO60888 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CUTAO60888 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CUTAO60888 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CUTAO60888 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CUTAO60888 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CUTAO60888 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CUTAO60888 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CUTAO60888 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.87■□□□□ 0.77
CUTAO60888 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.87■□□□□ 0.77
CUTAO60888 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CUTAO60888 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CUTAO60888 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CUTAO60888 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.87■□□□□ 0.77
CUTAO60888 SLC25A1P3-201ENST00000395415 828 ntBASIC19.87■□□□□ 0.77
CUTAO60888 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CUTAO60888 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CUTAO60888 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CUTAO60888 IGHV3-52-201ENST00000519770 353 ntBASIC19.87■□□□□ 0.77
CUTAO60888 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.87■□□□□ 0.77
CUTAO60888 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CUTAO60888 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CUTAO60888 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CUTAO60888 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CUTAO60888 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CUTAO60888 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.87■□□□□ 0.77
CUTAO60888 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CUTAO60888 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CUTAO60888 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CUTAO60888 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CUTAO60888 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.86■□□□□ 0.77
CUTAO60888 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CUTAO60888 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CUTAO60888 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CUTAO60888 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CUTAO60888 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CUTAO60888 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.86■□□□□ 0.77
CUTAO60888 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CUTAO60888 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CUTAO60888 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CUTAO60888 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CUTAO60888 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.86■□□□□ 0.77
CUTAO60888 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CUTAO60888 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CUTAO60888 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CUTAO60888 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CUTAO60888 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.86■□□□□ 0.77
CUTAO60888 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.86■□□□□ 0.77
CUTAO60888 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.86■□□□□ 0.77
CUTAO60888 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.86■□□□□ 0.77
CUTAO60888 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.86■□□□□ 0.77
CUTAO60888 KRT8P26-201ENST00000534154 1276 ntBASIC19.86■□□□□ 0.77
CUTAO60888 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.86■□□□□ 0.77
CUTAO60888 AC011840.4-201ENST00000578471 627 ntBASIC19.86■□□□□ 0.77
CUTAO60888 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.86■□□□□ 0.77
CUTAO60888 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CUTAO60888 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CUTAO60888 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CUTAO60888 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CUTAO60888 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CUTAO60888 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CUTAO60888 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CUTAO60888 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CUTAO60888 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.86■□□□□ 0.77
CUTAO60888 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CUTAO60888 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CUTAO60888 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CUTAO60888 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CUTAO60888 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CUTAO60888 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CUTAO60888 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CUTAO60888 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CUTAO60888 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.85■□□□□ 0.77
CUTAO60888 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CUTAO60888 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CUTAO60888 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CUTAO60888 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CUTAO60888 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.85■□□□□ 0.77
CUTAO60888 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.85■□□□□ 0.77
CUTAO60888 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CUTAO60888 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CUTAO60888 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CUTAO60888 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.85■□□□□ 0.77
CUTAO60888 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CUTAO60888 NKILA-202ENST00000614771 2598 ntBASIC19.85■□□□□ 0.77
CUTAO60888 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
CUTAO60888 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CUTAO60888 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CUTAO60888 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.84■□□□□ 0.77
CUTAO60888 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CUTAO60888 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CUTAO60888 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CUTAO60888 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
CUTAO60888 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CUTAO60888 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CUTAO60888 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CUTAO60888 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CUTAO60888 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CUTAO60888 AL031133.1-201ENST00000406807 723 ntBASIC19.84■□□□□ 0.77
CUTAO60888 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.84■□□□□ 0.77
CUTAO60888 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms