Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTNND1O60716 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CTNND1O60716 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTNND1O60716 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.42■□□□□ 0.86
CTNND1O60716 NEFHP1-201ENST00000412845 2629 ntBASIC20.42■□□□□ 0.86
CTNND1O60716 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.42■□□□□ 0.86
CTNND1O60716 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CTNND1O60716 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CTNND1O60716 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTNND1O60716 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTNND1O60716 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.42■□□□□ 0.86
CTNND1O60716 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.42■□□□□ 0.86
CTNND1O60716 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.42■□□□□ 0.86
CTNND1O60716 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.42■□□□□ 0.86
CTNND1O60716 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.42■□□□□ 0.86
CTNND1O60716 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.42■□□□□ 0.86
CTNND1O60716 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.42■□□□□ 0.86
CTNND1O60716 AL031432.2-201ENST00000566714 459 ntBASIC20.42■□□□□ 0.86
CTNND1O60716 AL928711.1-201ENST00000570165 459 ntBASIC20.42■□□□□ 0.86
CTNND1O60716 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.42■□□□□ 0.86
CTNND1O60716 AC007064.4-201ENST00000637740 555 ntBASIC20.42■□□□□ 0.86
CTNND1O60716 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CTNND1O60716 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CTNND1O60716 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTNND1O60716 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.42■□□□□ 0.86
CTNND1O60716 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTNND1O60716 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTNND1O60716 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTNND1O60716 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CTNND1O60716 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.41■□□□□ 0.86
CTNND1O60716 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CTNND1O60716 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CTNND1O60716 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTNND1O60716 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.41■□□□□ 0.86
CTNND1O60716 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.41■□□□□ 0.86
CTNND1O60716 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTNND1O60716 AC074386.1-202ENST00000463561 864 ntBASIC20.41■□□□□ 0.86
CTNND1O60716 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTNND1O60716 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.41■□□□□ 0.86
CTNND1O60716 RFPL4AP1-201ENST00000530883 850 ntBASIC20.41■□□□□ 0.86
CTNND1O60716 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.41■□□□□ 0.86
CTNND1O60716 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.41■□□□□ 0.86
CTNND1O60716 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.41■□□□□ 0.86
CTNND1O60716 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.41■□□□□ 0.86
CTNND1O60716 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CTNND1O60716 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CTNND1O60716 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTNND1O60716 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CTNND1O60716 AC025580.3-201ENST00000617932 1424 ntBASIC20.41■□□□□ 0.86
CTNND1O60716 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.41■□□□□ 0.86
CTNND1O60716 KRT18P55-202ENST00000578578 1546 ntBASIC20.41■□□□□ 0.86
CTNND1O60716 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTNND1O60716 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.41■□□□□ 0.86
CTNND1O60716 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTNND1O60716 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.41■□□□□ 0.86
CTNND1O60716 PI4KAP1-204ENST00000612579 1703 ntBASIC20.41■□□□□ 0.86
CTNND1O60716 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.41■□□□□ 0.86
CTNND1O60716 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.41■□□□□ 0.86
CTNND1O60716 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTNND1O60716 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CTNND1O60716 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTNND1O60716 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.41■□□□□ 0.86
CTNND1O60716 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CTNND1O60716 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CTNND1O60716 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.41■□□□□ 0.86
CTNND1O60716 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTNND1O60716 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
CTNND1O60716 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTNND1O60716 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CTNND1O60716 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTNND1O60716 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTNND1O60716 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTNND1O60716 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTNND1O60716 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CTNND1O60716 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTNND1O60716 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
CTNND1O60716 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTNND1O60716 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CTNND1O60716 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTNND1O60716 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTNND1O60716 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.4■□□□□ 0.86
CTNND1O60716 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTNND1O60716 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CTNND1O60716 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CTNND1O60716 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.4■□□□□ 0.86
CTNND1O60716 ACTG1P14-201ENST00000446382 1122 ntBASIC20.4■□□□□ 0.86
CTNND1O60716 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
CTNND1O60716 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.4■□□□□ 0.86
CTNND1O60716 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.4■□□□□ 0.86
CTNND1O60716 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CTNND1O60716 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.4■□□□□ 0.86
CTNND1O60716 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.4■□□□□ 0.86
CTNND1O60716 AL590787.1-201ENST00000568856 1315 ntBASIC20.4■□□□□ 0.86
CTNND1O60716 AP002472.1-201ENST00000577490 586 ntBASIC20.4■□□□□ 0.86
CTNND1O60716 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.4■□□□□ 0.86
CTNND1O60716 AC023141.13-201ENST00000604991 943 ntBASIC20.4■□□□□ 0.86
CTNND1O60716 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.4■□□□□ 0.86
CTNND1O60716 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CTNND1O60716 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.4■□□□□ 0.86
CTNND1O60716 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms