Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYNCRIPO60506 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SYNCRIPO60506 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SYNCRIPO60506 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SYNCRIPO60506 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SYNCRIPO60506 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SYNCRIPO60506 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.96■□□□□ 0.46
SYNCRIPO60506 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.96■□□□□ 0.46
SYNCRIPO60506 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNCRIPO60506 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.95■□□□□ 0.46
SYNCRIPO60506 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SYNCRIPO60506 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SYNCRIPO60506 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.95■□□□□ 0.46
SYNCRIPO60506 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNCRIPO60506 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNCRIPO60506 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
SYNCRIPO60506 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNCRIPO60506 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SYNCRIPO60506 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.95■□□□□ 0.46
SYNCRIPO60506 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNCRIPO60506 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.95■□□□□ 0.46
SYNCRIPO60506 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNCRIPO60506 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.95■□□□□ 0.46
SYNCRIPO60506 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.95■□□□□ 0.46
SYNCRIPO60506 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
SYNCRIPO60506 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.95■□□□□ 0.46
SYNCRIPO60506 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.95■□□□□ 0.46
SYNCRIPO60506 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.95■□□□□ 0.46
SYNCRIPO60506 AC025062.2-201ENST00000605477 670 ntBASIC17.95■□□□□ 0.46
SYNCRIPO60506 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.95■□□□□ 0.46
SYNCRIPO60506 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNCRIPO60506 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNCRIPO60506 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.95■□□□□ 0.46
SYNCRIPO60506 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.95■□□□□ 0.46
SYNCRIPO60506 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNCRIPO60506 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNCRIPO60506 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.95■□□□□ 0.46
SYNCRIPO60506 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SYNCRIPO60506 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SYNCRIPO60506 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SYNCRIPO60506 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNCRIPO60506 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNCRIPO60506 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SYNCRIPO60506 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNCRIPO60506 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNCRIPO60506 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNCRIPO60506 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNCRIPO60506 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNCRIPO60506 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.94■□□□□ 0.46
SYNCRIPO60506 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
SYNCRIPO60506 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SYNCRIPO60506 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.94■□□□□ 0.46
SYNCRIPO60506 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.94■□□□□ 0.46
SYNCRIPO60506 AC135776.1-201ENST00000319817 2481 ntBASIC17.94■□□□□ 0.46
SYNCRIPO60506 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.94■□□□□ 0.46
SYNCRIPO60506 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNCRIPO60506 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNCRIPO60506 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNCRIPO60506 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNCRIPO60506 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SYNCRIPO60506 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNCRIPO60506 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SYNCRIPO60506 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SYNCRIPO60506 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.94■□□□□ 0.46
SYNCRIPO60506 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.94■□□□□ 0.46
SYNCRIPO60506 AC103564.2-201ENST00000432853 1299 ntBASIC17.94■□□□□ 0.46
SYNCRIPO60506 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.94■□□□□ 0.46
SYNCRIPO60506 POLD2P1-201ENST00000511220 997 ntBASIC17.94■□□□□ 0.46
SYNCRIPO60506 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.94■□□□□ 0.46
SYNCRIPO60506 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SYNCRIPO60506 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.94■□□□□ 0.46
SYNCRIPO60506 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SYNCRIPO60506 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SYNCRIPO60506 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.94■□□□□ 0.46
SYNCRIPO60506 AC010460.3-201ENST00000511359 1579 ntBASIC17.94■□□□□ 0.46
SYNCRIPO60506 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SYNCRIPO60506 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNCRIPO60506 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNCRIPO60506 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.94■□□□□ 0.46
SYNCRIPO60506 PMS2P7-201ENST00000506558 1336 ntBASIC17.94■□□□□ 0.46
SYNCRIPO60506 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.94■□□□□ 0.46
SYNCRIPO60506 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNCRIPO60506 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SYNCRIPO60506 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SYNCRIPO60506 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.93■□□□□ 0.46
SYNCRIPO60506 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.93■□□□□ 0.46
SYNCRIPO60506 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SYNCRIPO60506 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNCRIPO60506 KRT8P47-201ENST00000604727 1398 ntBASIC17.93■□□□□ 0.46
SYNCRIPO60506 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.93■□□□□ 0.46
SYNCRIPO60506 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SYNCRIPO60506 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.93■□□□□ 0.46
SYNCRIPO60506 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNCRIPO60506 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.93■□□□□ 0.46
SYNCRIPO60506 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SYNCRIPO60506 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.93■□□□□ 0.46
SYNCRIPO60506 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNCRIPO60506 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNCRIPO60506 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNCRIPO60506 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms