Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.79■□□□□ 0.28
DUX1O43812 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX1O43812 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX1O43812 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
DUX1O43812 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.79■□□□□ 0.28
DUX1O43812 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX1O43812 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.79■□□□□ 0.28
DUX1O43812 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX1O43812 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX1O43812 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
DUX1O43812 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DUX1O43812 GPR89P-201ENST00000407924 1495 ntBASIC16.79■□□□□ 0.28
DUX1O43812 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.79■□□□□ 0.28
DUX1O43812 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DUX1O43812 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX1O43812 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DUX1O43812 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.78■□□□□ 0.28
DUX1O43812 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DUX1O43812 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DUX1O43812 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
DUX1O43812 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.78■□□□□ 0.28
DUX1O43812 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
DUX1O43812 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
DUX1O43812 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DUX1O43812 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
DUX1O43812 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.78■□□□□ 0.28
DUX1O43812 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DUX1O43812 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.78■□□□□ 0.28
DUX1O43812 CRYGEP-201ENST00000412192 528 ntBASIC16.78■□□□□ 0.28
DUX1O43812 AC108073.2-201ENST00000464002 357 ntBASIC16.78■□□□□ 0.28
DUX1O43812 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.78■□□□□ 0.28
DUX1O43812 IGHV3-65-201ENST00000523210 341 ntBASIC16.78■□□□□ 0.28
DUX1O43812 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.78■□□□□ 0.28
DUX1O43812 AC008667.4-201ENST00000607370 168 ntBASIC16.78■□□□□ 0.28
DUX1O43812 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.78■□□□□ 0.28
DUX1O43812 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.78■□□□□ 0.28
DUX1O43812 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DUX1O43812 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
DUX1O43812 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DUX1O43812 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
DUX1O43812 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
DUX1O43812 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
DUX1O43812 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
DUX1O43812 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DUX1O43812 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DUX1O43812 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.77■□□□□ 0.28
DUX1O43812 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
DUX1O43812 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DUX1O43812 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
DUX1O43812 LINC00982-205ENST00000420957 435 ntBASIC16.77■□□□□ 0.28
DUX1O43812 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.77■□□□□ 0.28
DUX1O43812 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.77■□□□□ 0.28
DUX1O43812 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.77■□□□□ 0.28
DUX1O43812 MIR3687-2-201ENST00000577708 61 ntBASIC16.77■□□□□ 0.28
DUX1O43812 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.77■□□□□ 0.28
DUX1O43812 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.77■□□□□ 0.28
DUX1O43812 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.77■□□□□ 0.28
DUX1O43812 MIR3687-1-201ENST00000614492 61 ntBASIC16.77■□□□□ 0.28
DUX1O43812 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.77■□□□□ 0.28
DUX1O43812 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DUX1O43812 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.77■□□□□ 0.28
DUX1O43812 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DUX1O43812 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DUX1O43812 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
DUX1O43812 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.77■□□□□ 0.27
DUX1O43812 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DUX1O43812 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.77■□□□□ 0.27
DUX1O43812 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
DUX1O43812 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
DUX1O43812 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DUX1O43812 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.76■□□□□ 0.27
DUX1O43812 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
DUX1O43812 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
DUX1O43812 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
DUX1O43812 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DUX1O43812 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DUX1O43812 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.76■□□□□ 0.27
DUX1O43812 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
DUX1O43812 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
DUX1O43812 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DUX1O43812 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DUX1O43812 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
DUX1O43812 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DUX1O43812 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
DUX1O43812 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.76■□□□□ 0.27
DUX1O43812 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.76■□□□□ 0.27
DUX1O43812 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
DUX1O43812 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
DUX1O43812 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.76■□□□□ 0.27
DUX1O43812 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.76■□□□□ 0.27
DUX1O43812 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.76■□□□□ 0.27
DUX1O43812 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.76■□□□□ 0.27
DUX1O43812 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.76■□□□□ 0.27
DUX1O43812 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.76■□□□□ 0.27
DUX1O43812 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
DUX1O43812 AC010327.4-202ENST00000591484 748 ntBASIC16.76■□□□□ 0.27
DUX1O43812 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.76■□□□□ 0.27
DUX1O43812 AL353135.1-201ENST00000606729 504 ntBASIC16.76■□□□□ 0.27
DUX1O43812 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
DUX1O43812 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms