Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN4O43707 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN4O43707 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.69■□□□□ 0.74
ACTN4O43707 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN4O43707 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN4O43707 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN4O43707 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.69■□□□□ 0.74
ACTN4O43707 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.69■□□□□ 0.74
ACTN4O43707 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.69■□□□□ 0.74
ACTN4O43707 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.69■□□□□ 0.74
ACTN4O43707 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.69■□□□□ 0.74
ACTN4O43707 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN4O43707 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
ACTN4O43707 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN4O43707 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ACTN4O43707 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.69■□□□□ 0.74
ACTN4O43707 AC060834.1-201ENST00000443027 2032 ntBASIC19.69■□□□□ 0.74
ACTN4O43707 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN4O43707 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.69■□□□□ 0.74
ACTN4O43707 NKILA-202ENST00000614771 2598 ntBASIC19.69■□□□□ 0.74
ACTN4O43707 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ACTN4O43707 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
ACTN4O43707 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN4O43707 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACTN4O43707 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACTN4O43707 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACTN4O43707 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.68■□□□□ 0.74
ACTN4O43707 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACTN4O43707 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACTN4O43707 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACTN4O43707 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACTN4O43707 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ACTN4O43707 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ACTN4O43707 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
ACTN4O43707 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACTN4O43707 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ACTN4O43707 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.68■□□□□ 0.74
ACTN4O43707 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.68■□□□□ 0.74
ACTN4O43707 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.68■□□□□ 0.74
ACTN4O43707 AC091607.1-201ENST00000490318 1060 ntBASIC19.68■□□□□ 0.74
ACTN4O43707 KRT8P26-201ENST00000534154 1276 ntBASIC19.68■□□□□ 0.74
ACTN4O43707 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
ACTN4O43707 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACTN4O43707 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ACTN4O43707 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.68■□□□□ 0.74
ACTN4O43707 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.68■□□□□ 0.74
ACTN4O43707 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ACTN4O43707 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ACTN4O43707 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACTN4O43707 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACTN4O43707 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACTN4O43707 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACTN4O43707 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ACTN4O43707 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACTN4O43707 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ACTN4O43707 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACTN4O43707 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ACTN4O43707 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACTN4O43707 AC046185.3-201ENST00000623228 1824 ntBASIC19.67■□□□□ 0.74
ACTN4O43707 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACTN4O43707 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACTN4O43707 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACTN4O43707 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.67■□□□□ 0.74
ACTN4O43707 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.67■□□□□ 0.74
ACTN4O43707 OR6D1P-202ENST00000641007 5290 ntBASIC19.67■□□□□ 0.74
ACTN4O43707 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACTN4O43707 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACTN4O43707 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ACTN4O43707 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ACTN4O43707 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACTN4O43707 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACTN4O43707 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.67■□□□□ 0.74
ACTN4O43707 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.67■□□□□ 0.74
ACTN4O43707 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.67■□□□□ 0.74
ACTN4O43707 AC109462.3-201ENST00000573934 613 ntBASIC19.67■□□□□ 0.74
ACTN4O43707 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.67■□□□□ 0.74
ACTN4O43707 AC090616.6-201ENST00000582640 721 ntBASIC19.67■□□□□ 0.74
ACTN4O43707 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.67■□□□□ 0.74
ACTN4O43707 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.67■□□□□ 0.74
ACTN4O43707 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.67■□□□□ 0.74
ACTN4O43707 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.67■□□□□ 0.74
ACTN4O43707 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ACTN4O43707 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACTN4O43707 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACTN4O43707 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ACTN4O43707 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACTN4O43707 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.67■□□□□ 0.74
ACTN4O43707 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACTN4O43707 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACTN4O43707 AC011676.5-201ENST00000624864 2660 ntBASIC19.67■□□□□ 0.74
ACTN4O43707 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACTN4O43707 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACTN4O43707 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ACTN4O43707 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.67■□□□□ 0.74
ACTN4O43707 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.66■□□□□ 0.74
ACTN4O43707 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.66■□□□□ 0.74
ACTN4O43707 AL049757.1-201ENST00000616842 1596 ntBASIC19.66■□□□□ 0.74
ACTN4O43707 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ACTN4O43707 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ACTN4O43707 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms