Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.23■□□□□ 0.51
MSI1O43347 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
MSI1O43347 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MSI1O43347 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MSI1O43347 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
MSI1O43347 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MSI1O43347 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MSI1O43347 RNPS1P1-201ENST00000507437 918 ntBASIC18.23■□□□□ 0.51
MSI1O43347 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MSI1O43347 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.23■□□□□ 0.51
MSI1O43347 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.23■□□□□ 0.51
MSI1O43347 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.23■□□□□ 0.51
MSI1O43347 STK25P1-201ENST00000585406 838 ntBASIC18.23■□□□□ 0.51
MSI1O43347 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.23■□□□□ 0.51
MSI1O43347 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MSI1O43347 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.23■□□□□ 0.51
MSI1O43347 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MSI1O43347 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MSI1O43347 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
MSI1O43347 FZD10-202ENST00000539839 3282 ntBASIC18.22■□□□□ 0.51
MSI1O43347 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
MSI1O43347 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MSI1O43347 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MSI1O43347 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
MSI1O43347 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.22■□□□□ 0.51
MSI1O43347 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MSI1O43347 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.22■□□□□ 0.51
MSI1O43347 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MSI1O43347 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MSI1O43347 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MSI1O43347 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MSI1O43347 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.22■□□□□ 0.51
MSI1O43347 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MSI1O43347 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.22■□□□□ 0.51
MSI1O43347 HNRNPDP1-201ENST00000439535 754 ntBASIC18.22■□□□□ 0.51
MSI1O43347 AC018712.1-201ENST00000455767 687 ntBASIC18.22■□□□□ 0.51
MSI1O43347 AF186996.4-201ENST00000467186 377 ntBASIC18.22■□□□□ 0.51
MSI1O43347 AC073648.2-201ENST00000510116 352 ntBASIC18.22■□□□□ 0.51
MSI1O43347 AC025062.2-201ENST00000605477 670 ntBASIC18.22■□□□□ 0.51
MSI1O43347 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.22■□□□□ 0.51
MSI1O43347 AC073592.4-201ENST00000623827 446 ntBASIC18.22■□□□□ 0.51
MSI1O43347 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.22■□□□□ 0.51
MSI1O43347 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.22■□□□□ 0.51
MSI1O43347 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MSI1O43347 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
MSI1O43347 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.22■□□□□ 0.51
MSI1O43347 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MSI1O43347 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MSI1O43347 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MSI1O43347 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MSI1O43347 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MSI1O43347 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MSI1O43347 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MSI1O43347 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
MSI1O43347 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.22■□□□□ 0.51
MSI1O43347 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
MSI1O43347 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MSI1O43347 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.21■□□□□ 0.51
MSI1O43347 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
MSI1O43347 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
MSI1O43347 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MSI1O43347 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MSI1O43347 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
MSI1O43347 AC003669.1-201ENST00000334569 611 ntBASIC18.21■□□□□ 0.51
MSI1O43347 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MSI1O43347 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
MSI1O43347 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.21■□□□□ 0.51
MSI1O43347 RPS2P1-201ENST00000434010 821 ntBASIC18.21■□□□□ 0.51
MSI1O43347 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
MSI1O43347 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.21■□□□□ 0.51
MSI1O43347 MTDHP4-201ENST00000600287 670 ntBASIC18.21■□□□□ 0.51
MSI1O43347 AL049840.3-201ENST00000602669 611 ntBASIC18.21■□□□□ 0.51
MSI1O43347 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MSI1O43347 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
MSI1O43347 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
MSI1O43347 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
MSI1O43347 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MSI1O43347 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.21■□□□□ 0.51
MSI1O43347 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MSI1O43347 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.21■□□□□ 0.51
MSI1O43347 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MSI1O43347 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MSI1O43347 HLA-A-201ENST00000376802 1334 ntBASIC18.21■□□□□ 0.51
MSI1O43347 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.5
MSI1O43347 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
MSI1O43347 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MSI1O43347 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MSI1O43347 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.2■□□□□ 0.5
MSI1O43347 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MSI1O43347 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MSI1O43347 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.2■□□□□ 0.5
MSI1O43347 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
MSI1O43347 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MSI1O43347 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
MSI1O43347 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
MSI1O43347 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
MSI1O43347 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.2■□□□□ 0.5
MSI1O43347 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.2■□□□□ 0.5
MSI1O43347 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
MSI1O43347 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms